Gene PMN2A_1526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1526 
Symbol 
ID3606924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp197120 
End bp197776 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content38% 
IMG OID637688404 
ProductNADH dehydrogenase subunit I 
Protein accessionYP_292717 
Protein GI72383362 
COG category[C] Energy production and conversion 
COG ID[COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 
TIGRFAM ID[TIGR00403] NADH-plastoquinone oxidoreductase subunit I protein
[TIGR01971] NADH-quinone oxidoreductase, chain I 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGGTT TCCTTGAAAA AGTTGCCGAC TACACTAAAG AAGCCGTTAG TGCAGCAAAA 
TATTTAGTTG ATGGACTAGG AGTTACATTC GACCACATGC GTCGAAGGCC TGTAACGGTT
CAATACCCTT ACGAAAAACT AATCCCCTCT GAGCGCTATA GAGGGAGGAT TCATTATGAA
TTTGATAAGT GCATTGCATG CGAAGTTTGC GTAAGGGTAT GCCCAATCAA TCTGCCAGTC
GTTGATTGGG TAATGAATAA AGAAACCAAG AAAAAAGAAT TAAGAAATTA TTCAATTGAC
TTTGGTGCAT GTATTTTTTG TGGAAATTGC GTTGAATATT GCCCTACAAA TTGCTTATCA
ATGACAGAAG AATATGAACT GTCTGCATTT GATAGACATA GCCTTAACTA CGATAATGTT
GCTCTTGGAA GACTACCAAC AAGCGTAACT TCAGATCCAT CAGTTCGTCC TCTCAGAGAA
TTACCTTATT TGCCAAAGGG CATAATGGAC CCTCATGAAT TACCCGCGAA CCAACTAAGA
GCAGGTAAGC TACCAAGTCA GATTATAAAA GAACTGCAAG CAGATAAATC AGAAGAAGAA
GGTAAGAATA ATTCGTCGGA TATGGTTCCA AATAAATTAA ATTCTACTAA CAAATGA
 
Protein sequence
MLGFLEKVAD YTKEAVSAAK YLVDGLGVTF DHMRRRPVTV QYPYEKLIPS ERYRGRIHYE 
FDKCIACEVC VRVCPINLPV VDWVMNKETK KKELRNYSID FGACIFCGNC VEYCPTNCLS
MTEEYELSAF DRHSLNYDNV ALGRLPTSVT SDPSVRPLRE LPYLPKGIMD PHELPANQLR
AGKLPSQIIK ELQADKSEEE GKNNSSDMVP NKLNSTNK