Gene PMN2A_1505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1505 
Symbol 
ID3606903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp179310 
End bp179969 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content32% 
IMG OID637688383 
Productinactive putative metal-dependent protease 
Protein accessionYP_292696 
Protein GI72383341 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.545719 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACAAATT TCCATAACTC AAAATCAAAA TTTTTATTAG CACTACATAG CTCCTCACAA 
TCCTTCGGAA TTGCCATTAA GGATACTGAA AATTCAGAAA AAATAATAAG AAGCGAAGTA
TTTAATATTG GGCGATCATT ATCGAACAAA TTATTTAGTT GTATTGAAAC AATGCTGCCT
AGAAAGTTTT GGAAGCAAAT AATCCGCATT TCAGTAGCAA AAGGCCCTGG AAGTTTTACC
AGTACAAGAC TAACAATCTC AATGGCTAGA ACAATTGCTC AGCAAATTGA TTGTTCATTA
GATTCCATGA GTTCATTTCA TTTAATGGCT CCAAGACTTT ACAAAGATCT TAATAAAAAT
CAAATCTTGA ATTCATTTTG GATAAAAGAT CTTTTGCCAC GAAGAGGAAT TGTCGCTGGC
AAGTATCAAC TAGTTAAAAT TCACAAAGGG TCAAATTTCC ATGAGTTTAA TGAAATAATT
TCTCCACAGT TAACAAGTAA TGAAAAAATT TTGAATCCCT CTATCGAGGC TTCTAATAAT
ATCGAAAAAG ATATCATCTC ACTTATCAAT TTTTCTCAAT ATTGTCATGA TTCAAATTTG
TCATCTGATT GGAGAAAAAC ATTGCCCATC TACCCAACTT CACCAATTGA CAATAAATAA
 
Protein sequence
MTNFHNSKSK FLLALHSSSQ SFGIAIKDTE NSEKIIRSEV FNIGRSLSNK LFSCIETMLP 
RKFWKQIIRI SVAKGPGSFT STRLTISMAR TIAQQIDCSL DSMSSFHLMA PRLYKDLNKN
QILNSFWIKD LLPRRGIVAG KYQLVKIHKG SNFHEFNEII SPQLTSNEKI LNPSIEASNN
IEKDIISLIN FSQYCHDSNL SSDWRKTLPI YPTSPIDNK