Gene PMN2A_1502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1502 
Symbol 
ID3606900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand+ 
Start bp176635 
End bp177651 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content38% 
IMG OID637688380 
Product3-oxoacyl-(acyl carrier protein) synthase III 
Protein accessionYP_292693 
Protein GI72383338 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.261292 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTAGTA ATTCTCAATT GGACTTAGGA ATATCCTTTG TTGGGAGCGG AAGTGCTACT 
CCACAAAAGA TAATCAAGAA TGATCAACTT GGTCAGAGAG TGGATACTAA TGATGAATGG 
ATTCAAACCA GAACAGGTAT TGGTCAAAGA AGGGTTATTG GAGAAAATGA GTCTCTGATT 
GATTTGGCTA CTGATGCAGC AGTGAATGCT GTCAAAATGG CTGATTGGGA TGTGCAAACT 
ATCGATTTGA TAATTCTTGC AACATCTACT CCAGAAGATT TATTTGGCTC GGCGCCTAAA 
ATTCAATCAA ATTTGGGAGC TTCAAATGCA GTCGCTTTTG ATTTAACTGC AGCTTGTAGT 
GGCTTTTTAT TTGCTTTGGT AACTGCCTCA CAATATTTAG CTTCTGGATC TATGAAAAGA 
GCTTTAGTGA TTGGAGCAGA CCAATTATCC AAATGGGTGG ATTGGGATGA TAGAAAGACC 
TGCGTTTTGT TTGGAGATGG AGCAGGAGCA GTAGCTCTTG AGAGTTCTGG TGATGAAAGT 
GGATTGATTG GATATGATTT GAAGTCTGAT GGAAGCAAAG GAGGTTGCTT AAATCTCTCT 
CAATCAAATG TTTTTTTAGA TTTAGTGCAA GGAGCTAACC ATCAAAAAGG GGAATATTTA 
CCAATCAAAA TGGAGGGAAA GGAAGTTTAT AAATTTGCAG TTAAAGAAGT TCCAATAATT 
CTTGGGGAAA TCTTAGAAAA ATGTCAAATC AAGTCAGAGA GTATCGATTG GCTTCTGTTG 
CACCAAGCTA ATCAAAGAAT TCTTGATGCT GTGGCTTCGA GATTTTCAAT ACCATCAGAA 
AAAGTGCTTT CAAATTTGAA ATATTATGGA AATACATCTG CAGCAACGAT CCCACTCATG 
CTTGATGAGG CAGTTAGAGA TAAGAGAATC AAATCAGGCG ATTTAATAGC TTGTAGTGGT 
TTTGGTGCTG GCTTGAGTTG GGGAGCAGCT TTGTTTTATT GGCATGGTCC CTATTAA
 
Protein sequence
MISNSQLDLG ISFVGSGSAT PQKIIKNDQL GQRVDTNDEW IQTRTGIGQR RVIGENESLI 
DLATDAAVNA VKMADWDVQT IDLIILATST PEDLFGSAPK IQSNLGASNA VAFDLTAACS 
GFLFALVTAS QYLASGSMKR ALVIGADQLS KWVDWDDRKT CVLFGDGAGA VALESSGDES 
GLIGYDLKSD GSKGGCLNLS QSNVFLDLVQ GANHQKGEYL PIKMEGKEVY KFAVKEVPII 
LGEILEKCQI KSESIDWLLL HQANQRILDA VASRFSIPSE KVLSNLKYYG NTSAATIPLM 
LDEAVRDKRI KSGDLIACSG FGAGLSWGAA LFYWHGPY