Gene PMN2A_1498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1498 
Symbol 
ID3606896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp172479 
End bp173000 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content36% 
IMG OID637688376 
Productphotosystem I assembly protein Ycf3 
Protein accessionYP_292689 
Protein GI72383334 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5010] Flp pilus assembly protein TadD, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCTAGAA GTCAAAACAA AGACAATTTT CTTGATAAGG CCTTCACGAA GATGGCTGAG 
GGAATAGTGA AAGTGATGCC AATCGACTCC AAAGAAAAAG AAGCCTATCT TTATTACAGA
AAAGGTTTGG CAGCTCAAAA TGATGGAGAT TACTCAGAGG CTCTGGAGTA TTACGAAGAA
AGCTTAAAAC TTGAGGACAA TCAAGTTGAT AGAGGAGAGA CATTAAAAAA TATGGCAATA
ATTTATATGA GTAATGGAGA CGAAGAGAGA GCAATAAATA CATATAAAAA AGCTTTAGGA
CAAAATCCTA AACAGCCATC TTGCTTGAAA AATATGGGAT TAATTTATGA AAAAAGAGGA
AGAATGGCTC AAAGAAATGG TAATCAAGAT GAGTGTGATA TTTGGTTCGA TCAGGCAGCG
GAAGTTTGGA GTAAAGCTGT TCGTTTATAC CCAGGAGGAT ATTTAGATAT AGAAAATTGG
CTGAAGACTA CAGGCAGAGG TAATGTTGAT GTTTATTTAT AA
 
Protein sequence
MPRSQNKDNF LDKAFTKMAE GIVKVMPIDS KEKEAYLYYR KGLAAQNDGD YSEALEYYEE 
SLKLEDNQVD RGETLKNMAI IYMSNGDEER AINTYKKALG QNPKQPSCLK NMGLIYEKRG
RMAQRNGNQD ECDIWFDQAA EVWSKAVRLY PGGYLDIENW LKTTGRGNVD VYL