Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_1498 |
Symbol | |
ID | 3606896 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | + |
Start bp | 172479 |
End bp | 173000 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637688376 |
Product | photosystem I assembly protein Ycf3 |
Protein accession | YP_292689 |
Protein GI | 72383334 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCTAGAA GTCAAAACAA AGACAATTTT CTTGATAAGG CCTTCACGAA GATGGCTGAG GGAATAGTGA AAGTGATGCC AATCGACTCC AAAGAAAAAG AAGCCTATCT TTATTACAGA AAAGGTTTGG CAGCTCAAAA TGATGGAGAT TACTCAGAGG CTCTGGAGTA TTACGAAGAA AGCTTAAAAC TTGAGGACAA TCAAGTTGAT AGAGGAGAGA CATTAAAAAA TATGGCAATA ATTTATATGA GTAATGGAGA CGAAGAGAGA GCAATAAATA CATATAAAAA AGCTTTAGGA CAAAATCCTA AACAGCCATC TTGCTTGAAA AATATGGGAT TAATTTATGA AAAAAGAGGA AGAATGGCTC AAAGAAATGG TAATCAAGAT GAGTGTGATA TTTGGTTCGA TCAGGCAGCG GAAGTTTGGA GTAAAGCTGT TCGTTTATAC CCAGGAGGAT ATTTAGATAT AGAAAATTGG CTGAAGACTA CAGGCAGAGG TAATGTTGAT GTTTATTTAT AA
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Protein sequence | MPRSQNKDNF LDKAFTKMAE GIVKVMPIDS KEKEAYLYYR KGLAAQNDGD YSEALEYYEE SLKLEDNQVD RGETLKNMAI IYMSNGDEER AINTYKKALG QNPKQPSCLK NMGLIYEKRG RMAQRNGNQD ECDIWFDQAA EVWSKAVRLY PGGYLDIENW LKTTGRGNVD VYL
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