Gene PMN2A_1448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1448 
Symbol 
ID3606845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp129896 
End bp131281 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content35% 
IMG OID637688324 
Productputative sodium transporter, Trk family 
Protein accessionYP_292639 
Protein GI72383284 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0168] Trk-type K+ transport systems, membrane components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.225676 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTATTA GGCAAGAAAC TTATAGAAGG CTTACGGTTC CGCAGTTTAC GGTGGTAACA 
GGTTTACTTG TGATTGCTTT TGGAACATTA TTATTGGCTA CACCTTTTTG TTCTAATGCA
AATGTAGGTC TATGGGAGGC ATTATTTACG GCAACTTCTG CTGTCACAGT TACGGGGTTA
TCTATTATTG ATATAGGAAT AGATTTGACA TTTTTTGGAC AAGTAATTTT AGCGATTATG
TTGTTAACTG GGGGCCTTGG TTTAATGGCT ATTACTACAT TTTTGCAGGG CTTTATTGTT
AGTGGAACAG AATTAAAAAC ACGTCTTGAT AGAGGTAAAA CTCTTGATGA ATTTGGAGTC
GGGGGTGTGG GTACAACGTT TAAAGGTATT GCGATTACAG CATCTATACT TATTTTTCTT
GGCTCTATTA CTTTATATTT TTTCGGCTTT AAAAATATAA CTAGCTCAAG TGAAAGGATT
TGGGCATCAA TTTTTCATAG TATATCTGCT TATAATAATG CTGGGTTTAG TTTATGGTCA
AGCAGTTTAC AAGATTATAG AGGTAATTGG GTAGTGAATT TTGTTTTAAT TACTTTAATT
ATATTAGGTG GTTTTGGATG GAGAGTAACT AATGATATTT GGATAAATCG TAGATCTTTA
AAATTAAGAA ATTTAAGTCT TCATACACGT TTAGTAATTA GATCATCTTT CATATTGATT
GCTCTGGGAT TCTTCGGATT GATTTTTACT GAATCGTTAG CTAGGGGTAG CTTCTTTTCG
TTAATTAATT TCGATGATCG TATTTTAACC GCTTTATTTA CTTCTGTTAG TTCACGAACT
GCAGGCTTTA CGAATTTGCC CATATCAATT GAAAGTGTCT CTGACTCTGG TCTTTTGTTG
ATAATGTTTC TTATGTTTAT TGGGGCAAGT CCAGGTGGCA CTGGAGGCGG AATTAAGACG
ACAACTATTG CTGCATTAAT GGCAGCCACA AGAGCAACTC TACGTGGTCA AAATGAAATC
ATTATTCGGA ATCGTCAGAT ATCTGACAAA GTAATTCTTA AAGCTGTTGG TATAACTGTT
GGTTCATTTT TATTTGTGTT GATTATGGCT TTATTATTAA GTTTGAGTAA TGGATTCAAT
AGTGGAGAGA ATTTTTCATT TTTAGAAATG CTTTTCACTT GTATTTCTGC TTTTGCAACT
GTAGGTTTTG ATCTGGGCGT AACCTCTAAG TTAGGACATG TCGGTCAATT AATTCTGATT
ATTGGAATGT TTGTTGGCAG ACTAGGAATC CTTTTATTCT TGAGCGCTGT ATGGCAAGCT
CTTAATAAAA GTAAGATTCA ACATCGCAAT CGAATTGGCT ATCCGAAGGA GGATCTCTAT
GTTTAA
 
Protein sequence
MSIRQETYRR LTVPQFTVVT GLLVIAFGTL LLATPFCSNA NVGLWEALFT ATSAVTVTGL 
SIIDIGIDLT FFGQVILAIM LLTGGLGLMA ITTFLQGFIV SGTELKTRLD RGKTLDEFGV
GGVGTTFKGI AITASILIFL GSITLYFFGF KNITSSSERI WASIFHSISA YNNAGFSLWS
SSLQDYRGNW VVNFVLITLI ILGGFGWRVT NDIWINRRSL KLRNLSLHTR LVIRSSFILI
ALGFFGLIFT ESLARGSFFS LINFDDRILT ALFTSVSSRT AGFTNLPISI ESVSDSGLLL
IMFLMFIGAS PGGTGGGIKT TTIAALMAAT RATLRGQNEI IIRNRQISDK VILKAVGITV
GSFLFVLIMA LLLSLSNGFN SGENFSFLEM LFTCISAFAT VGFDLGVTSK LGHVGQLILI
IGMFVGRLGI LLFLSAVWQA LNKSKIQHRN RIGYPKEDLY V