Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_1448 |
Symbol | |
ID | 3606845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | + |
Start bp | 129896 |
End bp | 131281 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637688324 |
Product | putative sodium transporter, Trk family |
Protein accession | YP_292639 |
Protein GI | 72383284 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.225676 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGTATTA GGCAAGAAAC TTATAGAAGG CTTACGGTTC CGCAGTTTAC GGTGGTAACA GGTTTACTTG TGATTGCTTT TGGAACATTA TTATTGGCTA CACCTTTTTG TTCTAATGCA AATGTAGGTC TATGGGAGGC ATTATTTACG GCAACTTCTG CTGTCACAGT TACGGGGTTA TCTATTATTG ATATAGGAAT AGATTTGACA TTTTTTGGAC AAGTAATTTT AGCGATTATG TTGTTAACTG GGGGCCTTGG TTTAATGGCT ATTACTACAT TTTTGCAGGG CTTTATTGTT AGTGGAACAG AATTAAAAAC ACGTCTTGAT AGAGGTAAAA CTCTTGATGA ATTTGGAGTC GGGGGTGTGG GTACAACGTT TAAAGGTATT GCGATTACAG CATCTATACT TATTTTTCTT GGCTCTATTA CTTTATATTT TTTCGGCTTT AAAAATATAA CTAGCTCAAG TGAAAGGATT TGGGCATCAA TTTTTCATAG TATATCTGCT TATAATAATG CTGGGTTTAG TTTATGGTCA AGCAGTTTAC AAGATTATAG AGGTAATTGG GTAGTGAATT TTGTTTTAAT TACTTTAATT ATATTAGGTG GTTTTGGATG GAGAGTAACT AATGATATTT GGATAAATCG TAGATCTTTA AAATTAAGAA ATTTAAGTCT TCATACACGT TTAGTAATTA GATCATCTTT CATATTGATT GCTCTGGGAT TCTTCGGATT GATTTTTACT GAATCGTTAG CTAGGGGTAG CTTCTTTTCG TTAATTAATT TCGATGATCG TATTTTAACC GCTTTATTTA CTTCTGTTAG TTCACGAACT GCAGGCTTTA CGAATTTGCC CATATCAATT GAAAGTGTCT CTGACTCTGG TCTTTTGTTG ATAATGTTTC TTATGTTTAT TGGGGCAAGT CCAGGTGGCA CTGGAGGCGG AATTAAGACG ACAACTATTG CTGCATTAAT GGCAGCCACA AGAGCAACTC TACGTGGTCA AAATGAAATC ATTATTCGGA ATCGTCAGAT ATCTGACAAA GTAATTCTTA AAGCTGTTGG TATAACTGTT GGTTCATTTT TATTTGTGTT GATTATGGCT TTATTATTAA GTTTGAGTAA TGGATTCAAT AGTGGAGAGA ATTTTTCATT TTTAGAAATG CTTTTCACTT GTATTTCTGC TTTTGCAACT GTAGGTTTTG ATCTGGGCGT AACCTCTAAG TTAGGACATG TCGGTCAATT AATTCTGATT ATTGGAATGT TTGTTGGCAG ACTAGGAATC CTTTTATTCT TGAGCGCTGT ATGGCAAGCT CTTAATAAAA GTAAGATTCA ACATCGCAAT CGAATTGGCT ATCCGAAGGA GGATCTCTAT GTTTAA
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Protein sequence | MSIRQETYRR LTVPQFTVVT GLLVIAFGTL LLATPFCSNA NVGLWEALFT ATSAVTVTGL SIIDIGIDLT FFGQVILAIM LLTGGLGLMA ITTFLQGFIV SGTELKTRLD RGKTLDEFGV GGVGTTFKGI AITASILIFL GSITLYFFGF KNITSSSERI WASIFHSISA YNNAGFSLWS SSLQDYRGNW VVNFVLITLI ILGGFGWRVT NDIWINRRSL KLRNLSLHTR LVIRSSFILI ALGFFGLIFT ESLARGSFFS LINFDDRILT ALFTSVSSRT AGFTNLPISI ESVSDSGLLL IMFLMFIGAS PGGTGGGIKT TTIAALMAAT RATLRGQNEI IIRNRQISDK VILKAVGITV GSFLFVLIMA LLLSLSNGFN SGENFSFLEM LFTCISAFAT VGFDLGVTSK LGHVGQLILI IGMFVGRLGI LLFLSAVWQA LNKSKIQHRN RIGYPKEDLY V
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