| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_1441 |
|---|
| Symbol | |
|---|
| ID | 3606838 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL2A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007335 |
|---|
| Strand | + |
|---|
| Start bp | 121835 |
|---|
| End bp | 124039 |
|---|
| Gene Length | 2205 bp |
|---|
| Protein Length | 734 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637688317 |
|---|
| Product | recombination factor protein RarA/unknown domain fusion protein |
|---|
| Protein accession | YP_292632 |
|---|
| Protein GI | 72383277 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.641024 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTCCAAAG ATCTGTTTGC TTTTAATGGT GAACAGCTAA TTCAGAATAA TGCTCCTTTA
GCTGATCGCT TACGGCCTCA AACACTGGAT GAATTTGTTG GCCAAGATCA CATTCTTGCT
CAAGGACGTT TATTGAGACG TTCAATTGTT GCTGACAAAG TAGGCAATTT ATTGCTTTAT
GGACCCCCTG GAGTTGGTAA GACTACTTTG GCTAGGATTA TCGCCTTAAA TACCTTATCT
CACTTTAGTG TCGTTAACGC AGCACTGGCT GGCATCAAGG ATTTGAGATC TGAGATAGAG
TCGGCAATCG ACAGATTAAA TAAATTTGGT AAACGCACAA TTTTATTTAT TGATGAGGTT
CATAGATTTA ATACTGCTCA ACAAGATGCC TTATTACCTT GGGTTGAAAA TGGAACTTTG
ACCCTTATTG GTGCCACAAC GGAAAACCCA TATTTTGAAG TAAATAAAGC GTTGGTAAGT
AGATCTAGAT TATTTCGTTT AAATAGTTTG AATTCAAAAG CATTACATCA ATTGCTGCAA
CGAGCTTTGA ATGATAAGAA GAGGGGATAT GGGTTGAAAT TAATCAATTT AGCTAGTGAA
GCTGAGGATC ATTTGGTTGA TGTATGTAAT GGCGATGCAC GCGTTCTGCT TAATGCGCTG
GAACTTGCTG TAGAGAGCAC TATTGCAAAT CAAGATACTT CAATCAATAT TGATCTCAAG
ATTGCTGAGG ATTCAATTCA AGAACGAGCG GTTTTATACG ACAAAAAAGG TGATGCTCAT
TTTGATACTA TTAGCGCTTT TATTAAGTCA TTAAGAGGCT CGGATCCTGA TGCGGCATTG
TTTTGGCTTG CTCGAATGTT GGAGGCTGGA GAAAGTCCAC GATTCATTTT TAGACGTATG
CTCATCGCAG CAGGAGAAGA TATTGGTCTT GCTGATCCCA ATGCAATTGT CATAGTTGAG
TCATGCGCTG CGGCTTTTGA TCGAATAGGT TTGCCAGAGG GTGTTTACCC ACTGGCTCAG
GCAACCTTGT ACTTGGCTTC AACTGAGAAA AGCAATAGTG TTAAGGCTAT TTTTAAGGCA
GTTCAGAAAG TTAAAGATTC CCAAAAGCAA AATGTTCCAT CTCATCTTAA AGATCCAAAT
CGAGATCAAG AATCTTTTGG AGATGGCATG GGTTACAGGT ATCCACATTC ATTTTCAAAA
AATTGGGTTC CACAGCAATA TTTGCCAGAC ACTTTGCTAA ACGAGATTTT TTGGGAGCCA
ACTGAACATG GATGGGAAGG GCAAAGACGA TCTCTTTTGA ATGAGAGAAG ATCTCAACAG
TTAGCTTCAT TAATTGAAGT TGAGCAACAA AATCCTTTAA CTATTACATC TGGCAAAGTT
GATAATGATT TGGATAAATG GTTATCTCGC CAAGTTTTGC AGGAGGGGGA ACGATTAAAA
CATTTGATGA CTAAATTATG GTCCGGCATT ACTTGGAAAA AAAATCATAG GGTTTTAGTT
TTAGCGCCTA GTTCTTTGCT TTGGTCTTTA AAGCCTTTAA GAGAGGCATC TGAAGGGGGC
GTTGTTTTGG CTGTATCAGA GGATAATCAT CCCAAGTTAT TAGCTGAATT AGAAGTTTTA
GCGCCTATGG AGCGACCTGT CTTAATTGAT TCAAAAGTTG AATCAATTAA AAAATTAGAA
GACAATCTCA AATTTGAGCT AATTGGAGGA AGGATTCCTT GGAAAGTTTT TTCTGCAACA
AATTTTTTTG AATTGTGGCC GATTCTTACT GAAAAATGTA CGGAGAATAC AGAATTAAGT
TTGATTATAA GTAACCCATG TTATGGCCCT GCCTTTTCTT TAAAGAAAAG ATTAGAGCTT
TATAGTAACA AGAAAAATAC TGATTTTTCA TTCTTGAGTG ATTTAATTTG TAAAGAGGAG
AAGTGGTTAA ATAAGCAAGA ACATAAAAAG AAATTTATTC TACAATTAGA AAAATTAGGC
TGGAATATTT CTTTTGAAGA ATGGACTGAG TTTATATATC AAAAAGTTGA TAATACTATA
ATTAAAAGGT GGCTTAATCA GGGAAGTGAG TATCGAGAAA TTATTCTCGA AAATTGTGAG
GAAGAAACAT TAATTCGATT GCAAGAATTA TTTAAAAGAT TGGATGGCCA GACTATAAAA
CAGAAGCTTA TACATACTAA ATTTCTTGCT AAGAATAGTA ATTAA
|
|---|
| Protein sequence | MSKDLFAFNG EQLIQNNAPL ADRLRPQTLD EFVGQDHILA QGRLLRRSIV ADKVGNLLLY
GPPGVGKTTL ARIIALNTLS HFSVVNAALA GIKDLRSEIE SAIDRLNKFG KRTILFIDEV
HRFNTAQQDA LLPWVENGTL TLIGATTENP YFEVNKALVS RSRLFRLNSL NSKALHQLLQ
RALNDKKRGY GLKLINLASE AEDHLVDVCN GDARVLLNAL ELAVESTIAN QDTSINIDLK
IAEDSIQERA VLYDKKGDAH FDTISAFIKS LRGSDPDAAL FWLARMLEAG ESPRFIFRRM
LIAAGEDIGL ADPNAIVIVE SCAAAFDRIG LPEGVYPLAQ ATLYLASTEK SNSVKAIFKA
VQKVKDSQKQ NVPSHLKDPN RDQESFGDGM GYRYPHSFSK NWVPQQYLPD TLLNEIFWEP
TEHGWEGQRR SLLNERRSQQ LASLIEVEQQ NPLTITSGKV DNDLDKWLSR QVLQEGERLK
HLMTKLWSGI TWKKNHRVLV LAPSSLLWSL KPLREASEGG VVLAVSEDNH PKLLAELEVL
APMERPVLID SKVESIKKLE DNLKFELIGG RIPWKVFSAT NFFELWPILT EKCTENTELS
LIISNPCYGP AFSLKKRLEL YSNKKNTDFS FLSDLICKEE KWLNKQEHKK KFILQLEKLG
WNISFEEWTE FIYQKVDNTI IKRWLNQGSE YREIILENCE EETLIRLQEL FKRLDGQTIK
QKLIHTKFLA KNSN
|
|---|
| |