Gene PMN2A_1436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1436 
Symbol 
ID3606833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp116194 
End bp117636 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content36% 
IMG OID637688312 
Productcysteine desulfurase activator complex subunit SufB 
Protein accessionYP_292627 
Protein GI72383272 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component 
TIGRFAM ID[TIGR01980] FeS assembly protein SufB 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0910011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCAAT CTAATACTGT TGAAGAAATT GTTTCCCAAC CTTATAAATA CGGTTTTATA 
ACTGAAATTG AAACTGAAAA GATCCCAAAA GGATTGAATG AAGATGTCAT TAGGTTAATT
TCCGCCAAAA AAAATGAACC AGAATTTTTA TTAAAATTTC GTTTAAGAGC TTATGAGCAA
TGGTTGAAGA TGAAAGAACC TGATTGGTCA GGTTTAACTT ATTCCAAAGT AGATTATCAG
GATCTTGTTT ATTATTCAGC CCCAAAACAA GACATTAAGA AGAAGAGTTT AGATGAAGTC
GATCCTAAAT TACTTGAAAC TTTTGAAAAG CTTGGAATAC CACTTAGTGA ACAAAAAAGA
TTATCTAATG TAGCTGTAGA TGCTGTCTTT GACAGTGTTT CTATAGCAAC TACATATAAG
GAAAAGCTAG CTGAACATGG AGTAATTTTC TGCTCTATTA GCGAGGCAAT TAGCGAATAC
CCTGATCTAA TTGAAAAATA TATGGGTACA GTCGTTCCTA TAAATGATAA CTTTTTTGCG
GCTCTAAATT CTGCAGTTTT TAGTGACGGT TCGTTTGTTT ACATACCCAA AGGTGTCGAA
TGTCCAATGG AACTATCATC TTATTTTAGA ATAAATTCTG GCGACACTGG TCAATTCGAA
CGAACTTTAA TTATTGCCGA AGAATCCTCC TCCGTTAGTT ATCTAGAGGG CTGTACAGCG
CCTATGTTTG ATACCAATAC ACTCCATGCT GCTGTTGTTG AGCTTGTCGC GCTCGATAAT
GCATCTATCA AATATTCAAC TGTGCAAAAT TGGTATGCAG GTAATGAAGA AGGAGTTGGA
GGAATATATA ACTTCGTCAC AAAAAGAGGG GAATGTAGAG GAAAGAAAAG CAAAATAAGC
TGGTCTCAAG TCGAAACAGG TTCTGCAATT ACATGGAAAT ACCCAAGTTG CGTATTACAA
GGAGACAATT CCATTGGTGA GTTTTATTCA ATTGCACTTA CTAATAATTG TCAGAAAGCG
GATACTGGGA CAAAAATGAT TCATATAGGA AAAAATACAA AATCAAAAAT CGTAAGTAAA
GGTATCAGTG CTGGAAAGTC TAAGAATAGC TATCGAGGTC TTGTATCCAT AAGCCCAAAT
GCTGAGGGCG CTCGAAATTA CAGTCAATGT GACTCAATGT TGATCGGTGA CAAAGCCAGT
GCAAATACAT ATCCATATAT TCAATCCAAA CAACCTCAGT CAAATATTGA ACATGAAGCT
AGTACTTGTA GGATTTCAGA AGATCAACTT TTTTACTTAC AAAGTAGAGG AATTGATTTC
GAGGAATCAG TCTCAATGTT AGTCAGTGGA TTTTGTAGTG ATGTTTTCAA TGAACTGCCT
ATGGAGTTTG CATCTGAGGC AGACAAACTT TTAGCTTTAA AATTGGAGGG TTCGGTTGGA
TAA
 
Protein sequence
MTQSNTVEEI VSQPYKYGFI TEIETEKIPK GLNEDVIRLI SAKKNEPEFL LKFRLRAYEQ 
WLKMKEPDWS GLTYSKVDYQ DLVYYSAPKQ DIKKKSLDEV DPKLLETFEK LGIPLSEQKR
LSNVAVDAVF DSVSIATTYK EKLAEHGVIF CSISEAISEY PDLIEKYMGT VVPINDNFFA
ALNSAVFSDG SFVYIPKGVE CPMELSSYFR INSGDTGQFE RTLIIAEESS SVSYLEGCTA
PMFDTNTLHA AVVELVALDN ASIKYSTVQN WYAGNEEGVG GIYNFVTKRG ECRGKKSKIS
WSQVETGSAI TWKYPSCVLQ GDNSIGEFYS IALTNNCQKA DTGTKMIHIG KNTKSKIVSK
GISAGKSKNS YRGLVSISPN AEGARNYSQC DSMLIGDKAS ANTYPYIQSK QPQSNIEHEA
STCRISEDQL FYLQSRGIDF EESVSMLVSG FCSDVFNELP MEFASEADKL LALKLEGSVG