Gene PMN2A_1433 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1433 
Symbol 
ID3606830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp112870 
End bp114120 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content33% 
IMG OID637688309 
Productcysteine desulphurases, SufS 
Protein accessionYP_292624 
Protein GI72383269 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0520] Selenocysteine lyase 
TIGRFAM ID[TIGR01979] cysteine desulfurases, SufS subfamily 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACAATT TAGTAAAAAA TATTGCTGAA AAAAGTAGAA ATGATTTCCC ATTATTTAAT 
GGAGATATTA ATAAAAATTT AATATACTTA GATCATGCAG CGACTAGTCA AAAGCCTAAA
CAAGTTATAG ATTCTCTAAA AAAATACTAT AGCTTTCAAA ATGCCAACGT TCATAGAGGT
GCCCATCAAC TAAGTGCACT CGCAACAGAA AAATTTGAAA ATTCTAGAAA GTTAACAGCA
AATTTTATAA ATAGTAAGAA TGAAAAAGAG ATTATTTTTA CTAGGAATGC TACGGAAGCT
ATAAACCTTG TGGCTTATAC ATGGGGCAAT TATGAACTTC AGGAAAACGA CGAAATCTTA
ATAAGTTTAA TGGAGCATCA CAGTAATATA GTCCCTTGGC AATTAATAGC CAAGGCAAAA
AAGTGCAAGC TAATTTATAT CAATATTGAT AAAAACGGAG AATTAGATTT TGATGATTTT
AAAAAAAAAT TGAGTGATAA AACTAAAATA GTCAGCCTTG TTCACGTAAG TAATACACTA
GGTTGTTGTA ATCCTATCGA GGAAATTTCA TCCCTTGCAC ACCAAAAAGG TAGCTTAGTT
CTTTTAGATG CTTGCCAAAG TCTTGCTCAT AAGCAGGTAG ATATTAAAAA ACTTGGTATT
GATTTTCTGG CAGGATCTTC TCATAAACTT TGCGGTCCTA CTGGAATAGG TTTTTTATGG
GGTAGAGAAG AAATTTTAAA AAAAATTCCT CCTTTCCTTG GTGGAGGAGA GATGATTAAT
GAAGTTTTTA AGGACAACAG CACATGGGCA GAGTTACCGC ATAAATTCGA AGCGGGTACT
CCAGCTATTG GGGAAGCCAT CGGTATGGGA ACTGCACTTC AGTATTTACA GTCAATTGGA
TTAAACGAAA TCCATAATTA CGAAAAAGAA TTAACAAAAT ATCTTTTCGA AAAATTAGAG
GAAATAGATG ATTTAAAAAT TCTTGGTCCT AGCCCTTTAA TTCAGCCTGA TAGAGGGCCT
TTAGCAACAT TTTATATTAA AGGTATTCAC TCAAATGATG TTGCTGAGTT ACTTGATAAC
AGCAATATTT ACATAAGAAG TGGTCATCAT TGCTGCCAAC CACTTCATCG CTTCTATGGC
ATAAAAAGCA CAGCCAGAGC AAGCTTGAGC TTTACATCTA CTCCATCTGA AATTGATTCT
CTTGCTGAAG AACTAAAATC AGTAATTTCT TTTTTAAAGA AAAATTCTTA A
 
Protein sequence
MNNLVKNIAE KSRNDFPLFN GDINKNLIYL DHAATSQKPK QVIDSLKKYY SFQNANVHRG 
AHQLSALATE KFENSRKLTA NFINSKNEKE IIFTRNATEA INLVAYTWGN YELQENDEIL
ISLMEHHSNI VPWQLIAKAK KCKLIYINID KNGELDFDDF KKKLSDKTKI VSLVHVSNTL
GCCNPIEEIS SLAHQKGSLV LLDACQSLAH KQVDIKKLGI DFLAGSSHKL CGPTGIGFLW
GREEILKKIP PFLGGGEMIN EVFKDNSTWA ELPHKFEAGT PAIGEAIGMG TALQYLQSIG
LNEIHNYEKE LTKYLFEKLE EIDDLKILGP SPLIQPDRGP LATFYIKGIH SNDVAELLDN
SNIYIRSGHH CCQPLHRFYG IKSTARASLS FTSTPSEIDS LAEELKSVIS FLKKNS