Gene PMN2A_1428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1428 
Symbol 
ID3606825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp107347 
End bp109335 
Gene Length1989 bp 
Protein Length662 aa 
Translation table11 
GC content33% 
IMG OID637688304 
ProductABC transporter ATP-binding protein 
Protein accessionYP_292619 
Protein GI72383264 
COG category[R] General function prediction only 
COG ID[COG4178] ABC-type uncharacterized transport system, permease and ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.25331 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATCAT CAATTTCGAA AGCTCAAAAA GGACTGGTAA GCCAACTAAT TAAATTACGA 
AAGCTTACTC AGCCATATTT TCTACCTTAT ACAAAAAACA ATGGTTGGCT ATTTGTCTAT
TTATTAATAG CTTTATTATT TTGCGTAGGC GGAACAGTTC TGTTTTTACT CACAGGTTTA
ATGAGCCTGT TAACCAATTT AGCTCCAGAT GTAACCAACC AATTTTTAGG AGGAGTTCAA
AATTCCTTAA AAGTGATTTG GAATGGTCCG TCGGGAATAA TAATTTCAAG CTTGTTTGCC
TTAGGAATTT TTTCATTTAT CACAGTTCGT GGTCAGTTAA GGCAAAGGAG ATGGCTTCCT
TGGCTTTTAC TAGGAGTAAT TATATTGATG CTATTGTCTG TCAATGGAAT TAATGCTGGA
ATTACATTTC TTGTTAGAGA TATCACTAAT GCATTAATAC AAAAAGATGA AAGTGAAAGT
TATAAAAATT TGTGGATTCT TGGAATTTGT TTTATTGCAG CACTTCCAAT AAGAAGCTTC
CAATTTTATT TTTCAGCAAA ACTACAGCTC TTATGGAGAG AGTGGTTATC CAAAAGCCTA
ATAACAGACT ATTTAGATGA CAGGACATAT TATATATTAA ATCCCAACGA TGAATCTGAA
ACGAATGTCG ATAATCCGGA TCAAAGAATT ACAGAAGATG CAAGAGACTT TACTGCGCAA
ACAATTGATC TATCGTTAAA TATTTTTGAT TCTTTATTAG TATTTTCACT AAACATTTTT
ATTTTACTAA GTATAAGTAA AGAACTAACA CTTGCCCTAA TTGTTTATGC CACATTAGTT
TCATCTTTAC TACTTTTTGC GAGTAGAAAG CTATTTAAAT TAAATTATGA TCAATTAAGA
TTTGAAGCTG ATTTTCGTTA CGGTCTTGTA CATGTAAGAA ACAATGCAGA ATCAATTGCT
TTTTACTCTG GTGAAAATCA AGAAGAAAAA GAAGTAAGTA GAAGGCTAAA ATCTGTAGTT
GATAACTTTA ATCTTTTAAT AATATGGGAA GCATTATTAA GAGTGCTCCA ACGCTCAGGA
ATTTATGGAA GTGTCTTTAT TCCTTTCATT ATTCTCGCAG GACCAATTCT TAGCGGCCAA
ATGGACTATG GAAGTTTTCA ACAAGCCAAT TTGAACTACA ACCTTCTTGA AGGATCATTA
TTTTTTATTA TTTACAAAAT AGAGGCTTTA GCTAGATTTT CAGCTTCGAT AGGAAGACTT
GAAGGATTTC AATCAAACAT GAATGAGATC AGAAACAACC AATTTGAGGA TTTTAAAGTA
GAAATTAAAA ACAATGATTC TATTATTCTC AAAAATGTAA GTATTAAAAC CCCTGGAAAA
GATAATTATC TAATTAATAA CTTAAATCTA AGTCTGGAGA CAGGTCAAAG TTTACTTGTA
GTAGGGCCTT CTGGTTGCGG TAAAACGTCT TTACTTAGAG CTATTAGCGG TCTATGGGCA
ATTCAATCTG GTGAGATAGA AACCCCATCA AATGGTGAGT TACTTTTTAT TCCACAAAAA
CCATACATGA CTCTTGGCTC ATTGAGAGAA CAGCTTTGCT ACCCATTAGA TAAAAACAGA
TTCAGTGATG ATCACCTAAA AGCCGTTTTA GAAGAAGTCA AGTTACCTCA AATTATCCAA
AGGTATCCTG ATCTAGATAT CAAACAAGAT TGGCAAAGAC TATTATCTCT GGGAGAGCAA
CAAAGGCTTG CTTTTGCAAG ACTTTTGCTG AATTCCCCTA AATATGTTGT TTTAGATGAA
GCAACAAGTG CATTAGATGT AAATACAGAA AAACATCTTT ATGAACTTCT TAACAAACGC
GAGATGGCTT GCATTAGCGT TGGTCATAGG CCAACCTTGA AGAACTATCA TGAAAATGTG
CTTGAAATAA CTGAGAACAA AGGTTGGCGA TTATTGCCTG CTGCAAGTTA CCAATTTACT
GAGAACTAG
 
Protein sequence
MTSSISKAQK GLVSQLIKLR KLTQPYFLPY TKNNGWLFVY LLIALLFCVG GTVLFLLTGL 
MSLLTNLAPD VTNQFLGGVQ NSLKVIWNGP SGIIISSLFA LGIFSFITVR GQLRQRRWLP
WLLLGVIILM LLSVNGINAG ITFLVRDITN ALIQKDESES YKNLWILGIC FIAALPIRSF
QFYFSAKLQL LWREWLSKSL ITDYLDDRTY YILNPNDESE TNVDNPDQRI TEDARDFTAQ
TIDLSLNIFD SLLVFSLNIF ILLSISKELT LALIVYATLV SSLLLFASRK LFKLNYDQLR
FEADFRYGLV HVRNNAESIA FYSGENQEEK EVSRRLKSVV DNFNLLIIWE ALLRVLQRSG
IYGSVFIPFI ILAGPILSGQ MDYGSFQQAN LNYNLLEGSL FFIIYKIEAL ARFSASIGRL
EGFQSNMNEI RNNQFEDFKV EIKNNDSIIL KNVSIKTPGK DNYLINNLNL SLETGQSLLV
VGPSGCGKTS LLRAISGLWA IQSGEIETPS NGELLFIPQK PYMTLGSLRE QLCYPLDKNR
FSDDHLKAVL EEVKLPQIIQ RYPDLDIKQD WQRLLSLGEQ QRLAFARLLL NSPKYVVLDE
ATSALDVNTE KHLYELLNKR EMACISVGHR PTLKNYHENV LEITENKGWR LLPAASYQFT
EN