Gene PMN2A_1375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1375 
Symbol 
ID3606770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp49216 
End bp51066 
Gene Length1851 bp 
Protein Length616 aa 
Translation table11 
GC content35% 
IMG OID637688250 
Productflavodoxin:flavin reductase-like domain-containing protein 
Protein accessionYP_292566 
Protein GI72383211 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0426] Uncharacterized flavoproteins
[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.170384 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAATAG AGCAAAATTC TTCGACAAAT TTAAACACTT TAATAAAAAA AACTATTCAG 
ATTCCCATTG AGGATAACTT CATTTGCTTA AGAAGCTTAA ACCCAAAAAG AACAAGATTT
GAAGTTGAAT ATTCTCTTGA GAAAGGTAGT TGCACTAATT CTTTTTTATT TAATTCTTCT
CAAGATGAAT ATTCTGAATC ACATGACTAT ATTTTAATTC ATCCTCCTGG TTTAACATTT
GAAAAAGAAT TTTTAGACGA ATTCGAGACA TTAATTAGTA GTGATTCGTC TGCAATAAAG
CTAGTCATGG GTCATATCAA TCCCAATAAA GTAGCTTTTG TGAAAAGAAT GAATGTGAAA
TATAAAAATT TAACGGTTAT TTGTTCTAAT CCAGGAGCAA AATTATTCAA AGAGATTTGG
AATTTACGAA AACCCTCGCA AAATACAAAT CCTAAAGAAG CATTGGAGAA AGTTGAAGTT
CTTCCAAATA TACAAATCAT CAAACAATTA GAAACTCATA CACTTAACAG TAATTTTGAG
GTTACGTTCA TTCCCGCGCC AACAGCTCGC TGGCCTGGTG GACTAATTGT TTTTGAAAAG
CAAACTGGTT TATTGATGAG TGATAAATTA TTCGGTGCTC ATGTTTATGA AGAAAAATGG
GCTGAATTAA ACAGTAGTAG CACGGAAGAA GAGAGAAGAC ATTACTTCGA TTGTCTAATG
GCGCCAATGT CTACCCAAGT CAATAGTATT ATCGAAAAAT TTGAAGACTT TGAGATTGAT
ACGATAGTAC CCGGACATGG ACCTGCAATC AGCGGTAGTT GGAGGAGTTT ATTAAACAAC
TACCAAAGCT GGGGAGAAAG CCAAAAATAC AGCAATTTAA GAGTTGCACT ATTATTTGCA
AGTGCATATG GAAATACTGC TGCTATTGCT GATGCCATTG CTAGAGGAAT TAGTAAAACA
GGGGTCAAAG TTAAGATTAT TAATTGTGAA TTCACCGCAT CAGATAGCTT AGTCACTGAA
ATTCGTAAAG CAGATGGATA TTTAATTGGA TCGCCAACAT TAGGAGGGCA TGCACCCACC
CCAATTGTTT CAGCACTTGG GTCGCTTTTG GCTGAGGGAG ATAGAGGAAA GCCGGCTGGA
GTATTTGGAA GTTATGGATG GAGTGGAGAA GCTCTTGATT TACTTGAAAA AAAATTAAAA
GATGGAGGCT TTAAATTTGG ATTCGAACCT ATCAAAATTA AATTTAGTCC TGACCCTTTA
ATGATTAAAA AACTTGAAGA AACAGGTATC CAATTTGGTA AGCAATTAAT TAATGCAAAA
TTACGTCAAC AAAGAAAGGC TAATGTAGGT TTAAATACAA GTAAAAGTGA TCCAACAATT
AATGCACTAG GAAGGGTCGT CGGATCACTA TGTATATTGA CTGCTCAAAA AGGAGATGAA
GATAATCTGA TTAGCGGAGC GATGGTTGCA AGTTGGGTTA GTCAAGCAAG CTTTTCTCCT
CCTGGTATTA CTATTGCAGT CGCTAAAGAA AGAGCTGTAG AAAACTTACT TCATACAGGA
GATAACTTTG CTCTTAACAT TTTAGAGCAA AATAATCACC AAAGCCTCCT TAAACAATTT
CTCCAATCAT TCAAACCTGG AGATAATAGA TTTACCGATC TTGAGATTAA ATTAAGTCCA
AGCAATCAGC CATTATTAAA CGAAGCTTTA GCCTGGCTGG AGGGTACAGT TAGTCAACGA
ATGGAGTGTG GGGATCATTG GCTGATATAT GCTGAGATTA AATATGGAAA AGTCATTAAA
AAAGATGGAG TAACAGCAGT TCATCATCGA AAAACCGGAG CGAACTACTA G
 
Protein sequence
MTIEQNSSTN LNTLIKKTIQ IPIEDNFICL RSLNPKRTRF EVEYSLEKGS CTNSFLFNSS 
QDEYSESHDY ILIHPPGLTF EKEFLDEFET LISSDSSAIK LVMGHINPNK VAFVKRMNVK
YKNLTVICSN PGAKLFKEIW NLRKPSQNTN PKEALEKVEV LPNIQIIKQL ETHTLNSNFE
VTFIPAPTAR WPGGLIVFEK QTGLLMSDKL FGAHVYEEKW AELNSSSTEE ERRHYFDCLM
APMSTQVNSI IEKFEDFEID TIVPGHGPAI SGSWRSLLNN YQSWGESQKY SNLRVALLFA
SAYGNTAAIA DAIARGISKT GVKVKIINCE FTASDSLVTE IRKADGYLIG SPTLGGHAPT
PIVSALGSLL AEGDRGKPAG VFGSYGWSGE ALDLLEKKLK DGGFKFGFEP IKIKFSPDPL
MIKKLEETGI QFGKQLINAK LRQQRKANVG LNTSKSDPTI NALGRVVGSL CILTAQKGDE
DNLISGAMVA SWVSQASFSP PGITIAVAKE RAVENLLHTG DNFALNILEQ NNHQSLLKQF
LQSFKPGDNR FTDLEIKLSP SNQPLLNEAL AWLEGTVSQR MECGDHWLIY AEIKYGKVIK
KDGVTAVHHR KTGANY