Gene PMN2A_1341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1341 
Symbol 
ID3606736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand- 
Start bp17075 
End bp18082 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content33% 
IMG OID637688217 
ProducttRNA-dihydrouridine synthase A 
Protein accessionYP_292533 
Protein GI72383178 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0042] tRNA-dihydrouridine synthase 
TIGRFAM ID[TIGR00742] tRNA dihydrouridine synthase A 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTCCA ATTCTTTAAA AACAAATGAA ATAGCTAACT ACAGATTAAG TATTGCTCCA 
ATGATGGATT GCACAGATAG GCATTTTCGT GTCCTTATGC GCCAGATCAC CAAAAAATCG 
CTTCTATACA CTGAAATGAT TGTGGCCCAA GCGCTCCATT ACAGCAAAAA CAGGAATAAA 
TTATTAGATT TTGATGAGAT TGAGCATCCT ATTTCCATAC AACTAGGAGG AGACAACCCG 
AAACTTTTAG CTGAAGCAGC TCAAATGGCT GAAGATTGGG GATATGACGA AATTAATTTA 
AATATTGGCT GCCCTAGTCC AAAAGTAAAA TCTGGCAACT TTGGAGCTTG TCTAATGGGA 
AAACCAAATA TAGTAGCCAG TTGCATAGAG AAAATGAAAA AAACATGCAA TATCCCAATA 
ACTGTCAAAC ACAGACTTGG TATTGATAAT CTCGACAGTG ATGATTATCT TCTCAAATTT 
GTTGATACTT GTTCACTTGC AGGAGCAGAC AGATTCATCG TTCATGCAAG AAAAGCTTGG 
CTTAATGGAT TAAATCCAAA AGAAAATCGT TCAATTCCAC CTCTTCAATA TGAAAGAGTT 
CAAAACTTAA AAAATAATAG GCCTGAGTTA ATTATTGAGC TGAACGGTGG AATAAATACA 
ATTAACGATT CTATTGAAGC TCTCAAAGTA TTTGATGGAG CAATGGTAGG AAGAGCTGCA 
TATTCTCATC CATTTCTTTG GACAAAAATT GATTCATTAA TTTTTGGACA AAAAGAAAAA 
TATTTATCAA GATCAAAAAT AATTAAAAAG CTTATTCCTT TTGCTCAAAA GCATTTAGAA 
AATGGTGGAC GTCTTTGGCA AATTTCAAGA CATATTTTAA ATCTGATAGA AAATATTCCT 
AATGCAAAAA TATTGAGACA AGAATTAAGT GAAAAATGTC AAACTCAGAA AGCTGATATT 
TCTATTTTAA AAAAAATTGC CCAACAACTT GAAGATGCTG GGCAATAA
 
Protein sequence
MISNSLKTNE IANYRLSIAP MMDCTDRHFR VLMRQITKKS LLYTEMIVAQ ALHYSKNRNK 
LLDFDEIEHP ISIQLGGDNP KLLAEAAQMA EDWGYDEINL NIGCPSPKVK SGNFGACLMG 
KPNIVASCIE KMKKTCNIPI TVKHRLGIDN LDSDDYLLKF VDTCSLAGAD RFIVHARKAW 
LNGLNPKENR SIPPLQYERV QNLKNNRPEL IIELNGGINT INDSIEALKV FDGAMVGRAA 
YSHPFLWTKI DSLIFGQKEK YLSRSKIIKK LIPFAQKHLE NGGRLWQISR HILNLIENIP 
NAKILRQELS EKCQTQKADI SILKKIAQQL EDAGQ