Gene PMN2A_1338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1338 
Symbol 
ID3606733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp13340 
End bp14737 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content37% 
IMG OID637688214 
Productserine phosphatase 
Protein accessionYP_292530 
Protein GI72383175 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAAA ATTCTCCAAT TTCAGAACAA CAAAATCAAC ATCCTACTAA TATCTTCTCA 
AGTGCTGCTT CCAAGTCTCT TAGCGATTTG GTTCATAGCC TTTCTCAAGA GCAAGTTGTT
AATCAAGATT TATTACTTTC ATTGAGCTTT GCTTTGCGAA GTTTTACTAA TTTACAGCGT
TTTCTTGAGC TTATTCCACT GCTTGTCACT CAATTAGTTG GCGTTAAAGG ATCATTGTTA
ATTCCATTTC AAGATAATGG AAGCCTTTGG CGGGAACAGT TACAAATGGT CCCTATTGAT
GAAGATCAGG AACTCTTTAG AAAATTATTT CTTTTAGAGA AAGGGAAGAA AACGGGGTTT
GGCATGGAGG GAAAAAATAT TGAAATGTTA GATTGTTTAG TTCAAAGACA TCTTGATTCT
TCTAATGTAA TTGCTACATC GATAGTTTCT CGAGGAAGGC AGCGAGGTCG ATTATATGCG
TTTGATAAAA AAGAGATTGT TTTTGGTAGT AATGTCCATC GAAAACATAT TCAAATAGTT
GCTGATCTTG CTGGAGTAGC GATAGAAAAC GATGCAATTT TTCAGGTGAT TCGTAATCAT
GAAAAAGTTG ATAGACAAAT AAGTATTGGT GCTGAAATCC AATCACAATT ATTACCTGAT
CAATGTCCAG TAATTGAAGG AGTTGAATTG GCTGCTTGCT GTAGGCCCGC TTTTCAAGTA
GGTGGCGATT ATTACGATTT TATGCCCACT CGCTCAGATT TAAATGAAAC AGCAAAAGCC
AGTGGGCGTT GGGCTTTGGT GATTGGTGAT GTTATGGGTA AAGGTGTTCC GGCTGGATTG
TTGATGACTA TGTTAAGAGG AATGCTTAGA GCGGAAGTTT TAACAGGACT ACCCCCTGAT
TCCATTTTGC ATGACCTGAA TCAATTAGCT CTTGAAGATC TGACTCAATC ACATAGGTTT
GTAACTTTGT TTTATTCTGA CTATGACGCT AAATCAAGAA AATTACGTTT TGCTAATGCA
GCACATAATC CTCCTTTGCT TTGGAGCTCC AAGACAAAAT CAATTAATAG ATTAGATACC
CCTGGTTTGT TAATAGGTCT TCAACCTGAA GCTGAATATG GATGTGGTGA GATATTTCTG
CAGCCTGGTG ATGTCCTTCT TTACTACACT GATGGAGTTA CTGAGGCACC CGGGATATCA
GGTGAACGTT TTGATGAAAA TCGTTTAATA ACTTTTTTAG ATAAATTTGC TAAGGAAGGC
TTGGGAGCCA AACAAATATT AAATAAACTT TTTGAAAGAT TAGATGGTTT TGTAGGTGTT
AGTGATCATC ATCTTGAAGA TGATGCGTCA ATGGTGGTTT TAAAAGTCAA AGAATCAACG
GTTCCTGAAT TAACTTAG
 
Protein sequence
MKENSPISEQ QNQHPTNIFS SAASKSLSDL VHSLSQEQVV NQDLLLSLSF ALRSFTNLQR 
FLELIPLLVT QLVGVKGSLL IPFQDNGSLW REQLQMVPID EDQELFRKLF LLEKGKKTGF
GMEGKNIEML DCLVQRHLDS SNVIATSIVS RGRQRGRLYA FDKKEIVFGS NVHRKHIQIV
ADLAGVAIEN DAIFQVIRNH EKVDRQISIG AEIQSQLLPD QCPVIEGVEL AACCRPAFQV
GGDYYDFMPT RSDLNETAKA SGRWALVIGD VMGKGVPAGL LMTMLRGMLR AEVLTGLPPD
SILHDLNQLA LEDLTQSHRF VTLFYSDYDA KSRKLRFANA AHNPPLLWSS KTKSINRLDT
PGLLIGLQPE AEYGCGEIFL QPGDVLLYYT DGVTEAPGIS GERFDENRLI TFLDKFAKEG
LGAKQILNKL FERLDGFVGV SDHHLEDDAS MVVLKVKEST VPELT