Gene PMN2A_1313 details

Gene Information

• Locus tag: PMN2A_1313
• Symbol: dnaK
• ID: 3606708
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. NATL2A
• Kingdom: Bacteria
• Replicon accession: NC_007335
• Strand: -
• Start bp: 1824623
• End bp: 1826515
• Gene Length: 1893 bp
• Protein Length: 630 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 637688189
• Product: molecular chaperone DnaK
• Protein accession: YP_292505
• Protein GI: 72383150
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.634921
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGGAAGG TTGTCGGAAT CGATCTAGGA ACTACAAATA GTTGTGTCGC TGTAATGGAG 
GGCGGTAAGC CTACAGTAAT AGCAAATGCT GAAGGATTTA GAACAACTCC ATCTGTCGTT 
GCTTATACAA AAAATCAAGA CCAATTGGTT GGGCAAATTG CCAAGCGCCA AGCGGTGATG 
AATCCAGAAA ATACTTTTTA TTCTTCAAAG AGGTTTGTTG GTCGAAGAGT TGATGAAGTA 
AATGACGAAT CAAAGGAAGT TAGTTATGGA GTTGAAAAAG CAGGCTCCAA TGTCAAAATA 
AAATGTCCAA TACTTGATAA GCAGTTTTCT CCTGAGGAAG TAAGTGCTCA AGTTTTAAGA 
AAACTTTCTG ATGATGCAGG CAAATACCTA GGTGAAACAG TAACTCAAGC AGTTATTACA 
GTTCCTGCTT ATTTCAATGA TTCACAAAGA CAAGCAACTA AAGATGCGGG AAAGATTGCA 
GGCCTAGAAG TCCTAAGAAT TATTAATGAG CCAACTGCTG CTGCTTTAGC ATATGGACTA 
GACAAAAAGA GTAATGAAAG AATTTTAGTT TTTGATTTGG GTGGAGGGAC TTTTGATGTA 
TCTGTTTTAG AAGTTGGTGA TGGAGTTTTC GAAGTTCTCT CTACTTCTGG AGATACTCAT 
TTGGGTGGTG ACGATTTTGA TAGAGTAATT GTTGATCATT TGGCCTCTAC ATTCAAAGGT 
AATGAAGGCA TTGACTTACG CCAAGATAAG CAAGCACTTC AACGCTTAAC TGAAGCAGCT 
GAAAAAGCTA AAATAGAATT ATCAAACGCT ACTCAAAGCG AAATAAATCT TCCATTTATA 
ACTGCTACGC CTGAAGGGCC TAAGCATCTT GATTTGACTC TTACAAGAGG AAAGTTTGAG 
GAGTTGGCCT CAAACCTGAT TGATCGCTGC AGAGTCCCCG TAGAGCAAGC CTTGAAAGAT 
GCAAAATTAT CTACTGGTGA AATAGATGAG ATTGTTATGG TTGGAGGCTC TACTCGAATG 
CCAGCTGTTA AAGAGTTAGT AAAAAGAGTA ACTACTAAGG ATCCAAATCA AACAGTGAAT 
CCAGATGAAG TAGTAGCTGT TGGAGCAGCT ATTCAAGGTG GAGTTCTTGC TGGAGAAGTT 
AAAGACATTT TGCTACTTGA TGTAACACCA TTGTCACTTG GGGTTGAAAC TTTGGGTGGG 
GTGATGACAA AAATGATTTC AAGAAATACT ACTGTTCCCA CTAAAAAAGC TGAGACTTAC 
TCAACTGCAG TTGATGGTCA AACCAATGTA GAAATTCACG TCTTACAAGG GGAACGTGAG 
ATGGCTTCTG ATAATAAAAG TCTAGGAACC TTTCGTTTAG ATGGAATTCC TCCTGCTCCT 
CGGGGTGTGC CGCAAATTGA AGTAACTTTT GACATCGATG CTAATGGAAT TCTTAGTGTT 
AATGCCAAAG ATAAAGGAAG TGGTAAAGAA CAAAGTATCT CTATTACTGG AGCATCCACT 
TTGTCGGATA ACGAAGTTGA TAAAATGGTT AAAGATGCAG AAATGAATGC TTCTGCAGAT 
AAAGAAAAGC GTGAAAAAAT TGATATTAAA AATCAAGCTG AAACACTTGT TTATCAGGCT 
GAAAAACAAA TCGGTGAGCT TGGCGATAAA GTTGATGAAG CAGCAAAAGC GAAAGTTGAA 
GAGAAACGCA TTAAGTTAAA AGAAGCGACC GAAAAAGATG ACTATGAATC CATGAAGACG 
CTAGTTGAGG AGCTACAACA AGAATTGTAT TCCTTAGGAG CTTCTGTATA TCAACAAGCG 
AATGATGCTT CTCAAGCCGC AGCAGATTCT AATACGGATA GTAAAGTTGA TGGTGATGAT 
GTTATTGATG CAGACTTTAC AGAGACAAAA TAA 

 

Protein sequence

MGKVVGIDLG TTNSCVAVME GGKPTVIANA EGFRTTPSVV AYTKNQDQLV GQIAKRQAVM 
NPENTFYSSK RFVGRRVDEV NDESKEVSYG VEKAGSNVKI KCPILDKQFS PEEVSAQVLR 
KLSDDAGKYL GETVTQAVIT VPAYFNDSQR QATKDAGKIA GLEVLRIINE PTAAALAYGL 
DKKSNERILV FDLGGGTFDV SVLEVGDGVF EVLSTSGDTH LGGDDFDRVI VDHLASTFKG 
NEGIDLRQDK QALQRLTEAA EKAKIELSNA TQSEINLPFI TATPEGPKHL DLTLTRGKFE 
ELASNLIDRC RVPVEQALKD AKLSTGEIDE IVMVGGSTRM PAVKELVKRV TTKDPNQTVN 
PDEVVAVGAA IQGGVLAGEV KDILLLDVTP LSLGVETLGG VMTKMISRNT TVPTKKAETY 
STAVDGQTNV EIHVLQGERE MASDNKSLGT FRLDGIPPAP RGVPQIEVTF DIDANGILSV 
NAKDKGSGKE QSISITGAST LSDNEVDKMV KDAEMNASAD KEKREKIDIK NQAETLVYQA 
EKQIGELGDK VDEAAKAKVE EKRIKLKEAT EKDDYESMKT LVEELQQELY SLGASVYQQA 
NDASQAAADS NTDSKVDGDD VIDADFTETK