Gene PMN2A_1299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1299 
Symbol 
ID3606694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1807317 
End bp1808228 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content38% 
IMG OID637688176 
Productformate and nitrite transporters 
Protein accessionYP_292492 
Protein GI72383137 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2116] Formate/nitrite family of transporters 
TIGRFAM ID[TIGR00790] formate/nitrite transporter 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTCAA GTGCCTCTCA AATGGACTAC GTCCTACCAA ATGAATTGGT AGATGGAATG 
ATTGCTGCAG GTGGCAAGAA ATCATCTGTA AGCGTAAAAA ACTTGCTAAT AAGAGGCTTC
TATTCAGGAG CAATTTTAGG TTTAGCGACA TGTCTTGCAA TTACTATTGG TATTCAATCT
GGGATGCCTT GGTTAGGTTC TTTTATATTT CCTTTTGGTT TTGCAAGTAT CGTTCTTTTC
GGTATGGAGC TTGTTACTGG TAATTTTGCG TTACTACCAA TGGCCGTATG GGCTGGAAAG
AGTTCTTGGT CTGCAACTGT AAGGAATTGG CTATGGGTTT GGATCGGTAA TTTTCTAGGT
ACAGCATTTG TTGCCGTACT ACTTTCAATT AGTTTATCAA GTGCTGGAAA TGTAGATCCA
TTAACTGCTG CTGAAGGTGG AAAAGGATGG GCAGTTGTAG CAGCAAAAAT AATAGCTATA
CATAAAGCAA ACACAGTTGT TAAATATGAA GCACTTGGAA GTACTGGTTT TTTCCTTGCA
TTTTTACGTG GAGTAATTGC AAACTGGCTG GTTTGTTTAG GTGTAACAAT GGCACTTGTA
AGTAAAAGTG TTCCAGGAAA GATACTTGCT TGCTGGCTAC CTATAACTGC ATTCCAAACA
ATGGGAATGG AGCACATAGT AGTTAATATG TTTTTGCATA CAACTGGCCC TCTACTTGGT
TCGGGTATTC CTTTTACAAA AGTAATTTTT TGGAATTTCT TACCAGTGAC GATTGGAAAT
ATTGTTGGAG GAATGGTATT TATTGGAATG CTTTTCTATA GCACCCACAA AACTCCTATC
TCTAATGTTT TACCAGACGT AAAAGATGAA AAATTAGAAC GAGAGCTCGA AGCACAACTT
GGTGCAAGAT AA
 
Protein sequence
MTSSASQMDY VLPNELVDGM IAAGGKKSSV SVKNLLIRGF YSGAILGLAT CLAITIGIQS 
GMPWLGSFIF PFGFASIVLF GMELVTGNFA LLPMAVWAGK SSWSATVRNW LWVWIGNFLG
TAFVAVLLSI SLSSAGNVDP LTAAEGGKGW AVVAAKIIAI HKANTVVKYE ALGSTGFFLA
FLRGVIANWL VCLGVTMALV SKSVPGKILA CWLPITAFQT MGMEHIVVNM FLHTTGPLLG
SGIPFTKVIF WNFLPVTIGN IVGGMVFIGM LFYSTHKTPI SNVLPDVKDE KLERELEAQL
GAR