Gene PMN2A_1290 details

Gene Information

• Locus tag: PMN2A_1290
• Symbol: aspS
• ID: 3606685
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. NATL2A
• Kingdom: Bacteria
• Replicon accession: NC_007335
• Strand: +
• Start bp: 1796417
• End bp: 1798255
• Gene Length: 1839 bp
• Protein Length: 612 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 637688167
• Product: aspartyl-tRNA synthetase
• Protein accession: YP_292483
• Protein GI: 72383128
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0173] Aspartyl-tRNA synthetase
• TIGRFAM ID: [TIGR00459] aspartyl-tRNA synthetase, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGATTG AGAATTTTAT GCGCAATAAG ACTTGTGGAG AACTACGAGC TTCCGCAATT 
AGCGCAAATG TTCAACTATG TGGTTGGGTT GATCGCAGAA GAGATCATGG CGGAGTAATT 
TTTATTGATC TAAGAGACCG TTCTGGAACA ATTCAAATCA CAGTTGATCC AGATCAAGGT 
CAAGATCTTT TTAGCATCGC TGAGAGTCTT AGAAATGAGA CTGTTCTGCA GATCAATGGA 
TTAGTAAGAG CAAGACCTGA CGAAGCTATT AATACAAAAA TCCCAACCGG TGAAGTAGAA 
GTCTTAGCTA AAAATATAAA AATTCTGAAT ACTGTCACTA GTACACTTCC TTTCTCAGTG 
TCAATTCATG ATGAGGAGAG TGTTAAAGAA GAAATCAGGC TAAAGCATAG ATATTTAGAT 
CTCAGAAGAG AGAGAATGAA TAATAATCTT CGATTGAGAC ATAACACTGT CAAGGCGGCT 
AGAAGTTTTC TTGAAAACGA AGGATTTATA GAAGTTGAAA CACCAATTTT GACTCGCTCA 
ACTCCTGAAG GAGCCAGAGA TTACTTAGTA CCCTCACGTG TATGTGGTGG CGAGTTTTTT 
GCTTTGCCGC AATCCCCGCA ATTATTCAAA CAATTGTTGA TGGTTGGTGG AGTTGAACGT 
TATTACCAAG TCGCTCGTTG TTTTCGTGAT GAAGATTTAC GCGCAGACAG GCAACCAGAA 
TTTACTCAAT TAGATATTGA AATGAGTTTT ATGGAGGAAA AAGAGATCAT CGAATTAAAT 
GAAAAATTAA TTGTAAGTAT ATGGAAAAAA ATTAAAGGGA TTGATCTCCA AACTCCATTT 
CCGAGAATGA CTTGGCAAGA AGCTATGGAT CGTTTTGGAA CTGACAGACC TGATACTCGA 
TATGGAATGG AGCTTGTCAA CACAAGTGAT TTATTTTCCA AAAGTGGATT TAAAGTTTTT 
TCAAATGCTA TTTCTTCTGG TGGATGCGTT AAGTGCATCA CCATTGAGGA TGGAAATAAT 
TTGATTAGTA ATGTAAGAAT AAAACCGGGT GGAGATATTT TTAGCGAAGC CCAAAAGGCT 
GGCGCTGGTG GACTAGCATT TATCAGGGTT CGAGATGATA AAGAAGTCGA TACAATTGGA 
GCCATAAAAG ATAATTTAAC TACCTCGCAA ATAAAAGAAC TCCTATTAAA AACCCAAGCT 
AAACCTGGAG ATCTAATACT TTTTGGTGCA GGGCCCACAA ACATTGTTAA TAGAACTTTA 
GATAGAGTTC GTCAATTTAT TGCGAAAGAT CTAAAGATAA TCTCAGACAA CGAATTAAAA 
ACTCAGTGGA ATTTTCTTTG GGTCACTGAT TTTCCTATGT TTGAATTCAA TTCTGATGAA 
AATCGTCTTG AAGCAATTCA TCATCCTTTC TGTGCTCCTA AGCCTGAAGA TATTGGTGAA 
TCAGAAAGCC TATGGAAAGA CAAATTACCC AATTCAAATG CTCAAGCGTA TGATCTAGTT 
CTTAATGGAT TAGAAATTGG CGGGGGATCT TTAAGAATTC ACAACTCAGA ACTTCAAAAA 
ACCGTACTAG AAGTAATTGG TCTATCAAAA AATGAAGCAG AAGAGCAATT TGGTTTTTTA 
ATTGATGCCC TTGCCATGGG TGCTCCACCA CATGGTGGGA TTGCATTTGG ACTGGACAGA 
ATAGTTATGC TCTTAGCCAA TGAAGATTCA ATTAGAGATA CTATTGCTTT TCCAAAAACA 
CAACAAGCTC GTTGTTCTAT GGCTAAAGCG CCTGCAAACG TGGAAAACAA ACAATTAGAA 
GACCTCCACA TAGCTTCTAC TTGGATAGAT CCTGATTGA 

 

Protein sequence

MMIENFMRNK TCGELRASAI SANVQLCGWV DRRRDHGGVI FIDLRDRSGT IQITVDPDQG 
QDLFSIAESL RNETVLQING LVRARPDEAI NTKIPTGEVE VLAKNIKILN TVTSTLPFSV 
SIHDEESVKE EIRLKHRYLD LRRERMNNNL RLRHNTVKAA RSFLENEGFI EVETPILTRS 
TPEGARDYLV PSRVCGGEFF ALPQSPQLFK QLLMVGGVER YYQVARCFRD EDLRADRQPE 
FTQLDIEMSF MEEKEIIELN EKLIVSIWKK IKGIDLQTPF PRMTWQEAMD RFGTDRPDTR 
YGMELVNTSD LFSKSGFKVF SNAISSGGCV KCITIEDGNN LISNVRIKPG GDIFSEAQKA 
GAGGLAFIRV RDDKEVDTIG AIKDNLTTSQ IKELLLKTQA KPGDLILFGA GPTNIVNRTL 
DRVRQFIAKD LKIISDNELK TQWNFLWVTD FPMFEFNSDE NRLEAIHHPF CAPKPEDIGE 
SESLWKDKLP NSNAQAYDLV LNGLEIGGGS LRIHNSELQK TVLEVIGLSK NEAEEQFGFL 
IDALAMGAPP HGGIAFGLDR IVMLLANEDS IRDTIAFPKT QQARCSMAKA PANVENKQLE 
DLHIASTWID PD