Gene PMN2A_1271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1271 
Symbol 
ID3606665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1777947 
End bp1778876 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content40% 
IMG OID637688147 
ProductFatty acid desaturase, type 1 
Protein accessionYP_292464 
Protein GI72383109 
COG category[I] Lipid transport and metabolism 
COG ID[COG1398] Fatty-acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTTCAA GTTTGATCGA AGCTTCGGCT CCATTAAAAA AACCAGTTGC TGCCGATAAA 
GCGATGGCTG CATCGAAGAA GCTTCAAGGC CATGTACCAA GGCGGATTCA GAATAAAAGG
GCGAGAAAAA GATGGGGAAC AGTCATATTC ATGCTGACAA TACATGCTTT AACCATATTT
ACTTTGCAAG CTCAATTTTG GAGCTGGCTT GCATTTTCTG GATTTATTTT CTTGTATTGG
GTAACTGCTT GCTTGGGAGT AACGACAGGA TATCATCGCC TTCTTTCACA TCGTTCTTTT
CAAGTTCCAA AATGGCTTGA AAGATTTTTT GCAACTTGTG GAGCATTAAG TTGCCAACAT
GGACCAATTG ATTGGGTCGG TCTTCATAGG CATCATCATA CTTTTTCCGA TACTGAAGCT
GATCATCATG ACAGTAATAA GGGATTCTGG TGGAGTCACA TGGGATGGAT GTTTGAAGAT
GTACCTGCCA TGAAAGCGGT ACCAAGACTT TCTGGAGATT TAATCAAAGA TCCATACTAT
CGGTTCTTAA ATAAAAATTT TTTACTTTTG CAACTACCCT TAGGCGCAAC ACTTTATTTA
ATTGGACAAT CAGCTGGAGT TGGAGGATGG GCAATGGTCC TATGGGGAAT ACCTCTAAGA
CTCGTTTTTG TTTATCACAT AACTTGGCTA GTTAATTCAG CAACTCATTG TTGGGGAACT
ATTGCGTATG AGAGTGGGGA TAATTCAAAA AATAATAAAT GGGTAGCAGC ACTTACATTT
GGTGAAGGAT GGCACAATAA TCATCATGCT TTCCCTAATT CAGCAAAGCA TGGCCTTCAA
CGCAAACAAA TAGATCTAAC TTGGCAACAC ATACGTTTTT TGAAAGCAAT TGGCTTAGCT
AAAAAAATTA GACTCCCTGT CGCGTCGTAA
 
Protein sequence
MVSSLIEASA PLKKPVAADK AMAASKKLQG HVPRRIQNKR ARKRWGTVIF MLTIHALTIF 
TLQAQFWSWL AFSGFIFLYW VTACLGVTTG YHRLLSHRSF QVPKWLERFF ATCGALSCQH
GPIDWVGLHR HHHTFSDTEA DHHDSNKGFW WSHMGWMFED VPAMKAVPRL SGDLIKDPYY
RFLNKNFLLL QLPLGATLYL IGQSAGVGGW AMVLWGIPLR LVFVYHITWL VNSATHCWGT
IAYESGDNSK NNKWVAALTF GEGWHNNHHA FPNSAKHGLQ RKQIDLTWQH IRFLKAIGLA
KKIRLPVAS