Gene PMN2A_1258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1258 
Symbol 
ID3606652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1765592 
End bp1767145 
Gene Length1554 bp 
Protein Length517 aa 
Translation table11 
GC content38% 
IMG OID637688134 
Productputative amidase enhancer 
Protein accessionYP_292451 
Protein GI72383096 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG2385] Sporulation protein and related proteins 
TIGRFAM ID[TIGR02669] SpoIID/LytB domain 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTAAAA GTTATTTAAA GGCTCAAAAG AGTTTTTTTG TTTTTGGTTT ACTTTTCTTG 
ATTGGTTTGC CTTATTCAAA TCAAGTAAGT ATTGCGTCTC CTCGCAAAGT TAAGTTTTTT
GAAACTCATC AGTCGCCTCC TGAGACGCCT TTAATTAGTT CAGGAAAAAA TGTTCTGCTT
GTTGGGATCA AGCCATATTT AGGAAAGGAA ATCATCAATG ATCAAAAATC TCCATCTTTG
AGGCTTGTAA GTATTGGTAG AAACTTGATT CTGAAAGATG CTAATGGAGT CATAAGAAAG
GCTAAAGAAA TTAATATTGG TTGGCGAGCA CAACAATTAT TAAATCCAAA AGTATTTGTT
CGAAACAAAA TTGGTCCTTT TGCAAGTTTC GAGTCTGCTG AAAGATTGGC AAATGATTTA
AAAGATAAAG GTATTGAATC AACTATTGCG CATCCCTTGG ATTGGGAGGT TTGGGTATCA
GGCGACATCG AGATTCCTCC AGCCATAAAG TCGACTTATC AAAAAATAAA AGTTTCAAAG
TTTGTTTTTC CTTATCTTGA TGGAAATGAT GGAAAGATTG CCCTCAAAGG TCCTATCTCT
TTGCAAGCTC CTGATGGGTT GCGCTGGGAG AAGGGGATAT ACTTAGGTCC ATTTTCGATC
CAGCCAGATG CATATGGAAG TTGGACTCTG GTTGAGCATG TTCCGATTGA GAGATATTTA
AACGGAGTCG TTCCTTATGA AATCGGCGCC AGTTCACCTG AAGCAGCACT AGCAGCGCAG
GCGGTACTAG CTAGAACATG GGCTATGGCC AATACCCATA GATTCAAAGT TGATGGATAC
AATCTTTGTA GTGATACCCA ATGTCAGGTT TATAAGGATC CATCTAAAGC CAATTTGAAA
ATTGCAACAG CTATAAAAAA AACAACTGGC AAAATTCTCA CTTGGAATAA AAAGCCAATA
AACACTGTTT ATCACGCAAC TAATGGTGGA GTAATGGCCT CGGTCGATGA AGCATGGTCA
ATTAATCAAG TTCCCTATTT GCAAATGCGC TTGGATGGTC CAAAGCACTG GGCTGGTTCG
GTTGATTTAC CTCTATCAAA TGAGAAAAAT TTGAAATCTT TTTTATTTTC CAAGTCTGAG
GCTTTTGGCT CTGATCATCC ACTTTTTAGA TGGGAACGAA CGATAGAGTC TTCTCAGATA
TCTAAACAGC TCAAAAAAGC TCAAAAAGTT GGCAGTTCTT TTTATCCATA TAAAATTGAA
GTTTTAAGGA GAGGAAGTAG TGGGAGAGTC ACTTCGTTAA AAATTGAAGG GAAGTCTGGT
TCTAAAATTT TGCTTAAACT TGATGACATT CGACGTGTTC TTGGAGAATT ACCAAGCACA
TTATTCGTTG TTAAAGAAAT TAAAGAAGGT AAATGGCTGT TTTCTGGTGG AGGTTTTGGC
CATGGAGCAG GAATGTCTCA GTCTGGGGCT ATAGAGTTAG CAAAAAAAGG ATGGACTACC
AAGCAAATTC TTGCTCATTA TTATCCGAAA ACTAAATATG GATTTTTGCC TTAG
 
Protein sequence
MIKSYLKAQK SFFVFGLLFL IGLPYSNQVS IASPRKVKFF ETHQSPPETP LISSGKNVLL 
VGIKPYLGKE IINDQKSPSL RLVSIGRNLI LKDANGVIRK AKEINIGWRA QQLLNPKVFV
RNKIGPFASF ESAERLANDL KDKGIESTIA HPLDWEVWVS GDIEIPPAIK STYQKIKVSK
FVFPYLDGND GKIALKGPIS LQAPDGLRWE KGIYLGPFSI QPDAYGSWTL VEHVPIERYL
NGVVPYEIGA SSPEAALAAQ AVLARTWAMA NTHRFKVDGY NLCSDTQCQV YKDPSKANLK
IATAIKKTTG KILTWNKKPI NTVYHATNGG VMASVDEAWS INQVPYLQMR LDGPKHWAGS
VDLPLSNEKN LKSFLFSKSE AFGSDHPLFR WERTIESSQI SKQLKKAQKV GSSFYPYKIE
VLRRGSSGRV TSLKIEGKSG SKILLKLDDI RRVLGELPST LFVVKEIKEG KWLFSGGGFG
HGAGMSQSGA IELAKKGWTT KQILAHYYPK TKYGFLP