| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_1257 |
|---|
| Symbol | |
|---|
| ID | 3606651 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL2A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007335 |
|---|
| Strand | - |
|---|
| Start bp | 1764230 |
|---|
| End bp | 1765546 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637688133 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_292450 |
|---|
| Protein GI | 72383095 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTTAG CCAAAATCAG TGGAGAAAAC CGACGCATTA AATCAATATT GTTTTTGATT
TGCTGCGCTT TGGCAGGAAT TTTTCCTCAT CTTATGGCGC CTAGCAAGAA TTTATTCCCT
TCAATTACTT TGGCTGTCTT GCTGGGTGGG TATGGGTTAA GAGTTGTTTT ACGAGATCGC
AGGGACAATT ATCAATTGCA AAACGAGTAT CTAATTAAGG AAGAAAAATT TGTTGAGACT
CTTCCCAAAG TAGATGTGTT GGTGGCAGCA CGTGATGAAG AAAATGTAAT AGAGCGATTA
GTTTCACGAC TTTTATCAAT TGAATATCCA GAGGAGAAGA TTTCTTTATG GATAATTGAT
GATGGAAGTC AAGATCGAAC ACCTGATTTA TTAAAAAAAT TACGTACAAG CTTTTCTAGA
ATTAATGTTT TAAGTCGTCC ATTGATGAGT GGTGGTGGAA AATCAGGAGC TCTGAATTCT
GTATTGAATA AAACTGATGG AGAGTGGTTA TTTATTCTTG ATGCTGATGC ACAACTACAG
AGCAATGTAT TACTTAGAGC AATAGCTCTT GCTTTGCATG GTGGATGGTC TGCTGTGCAG
TTAAGAAAAT CAGTTGTAAA TTGTGAGTTA AATCAAATTG CTTCATATCA AGCAATGGAG
ATGGCAATGG ATGCCGTTAT TCAAAGGGGC AGACTTGCTA GTGGGGGTGT TTCGGAGTTA
AGAGGTAATG GACAATTAAT TAATAGAAAA GTTCTTGAAT GTTGTGGAGG CTTTAATGAA
CAAACTATCA CTGACGATTT AGATCTAAGT TTCCGGTTTT TATTAACCCG ATCGCCAATA
GTAATAATGT GGGATCCACC TATTCAAGAG GAAGCAGTGG AATCATTGTC GGCTTTATTC
CGACAAAGAA AAAGATGGGC CGAGGGAGGT TTGCAAAGAT TTTTTGATTA CTGGCCCTTA
TTGATCTCAA ATCGACTTTC AAAATTTAAA AAAATAGATT TATCTTGCTT TTTCTTATTG
CAATATGTTT TACCGGTTGT ATCACTTATA GATTTGATTG TATCAATTAT TTTATTTGAA
ACGCCACTTT ATTGGCCACT ATCAATAGTT GCATTTGGTA TATCTAGTTT AGCTTTTTGG
AAAGGATGTT CTCAAAATAG CGAAGGTCCA AGATTACCAT CACCTAATTT TATTAATATA
CTAGGAGCCA CAATTTACCT TGCACATTGG TTTATTGTTA TACCGTTTAT AGTAGTTAAG
ATGTCACTAT TTCGTAAGAC GTTGATTTGG GAAAAAACTG ATCATATTGG TTCTTGA
|
|---|
| Protein sequence | MALAKISGEN RRIKSILFLI CCALAGIFPH LMAPSKNLFP SITLAVLLGG YGLRVVLRDR
RDNYQLQNEY LIKEEKFVET LPKVDVLVAA RDEENVIERL VSRLLSIEYP EEKISLWIID
DGSQDRTPDL LKKLRTSFSR INVLSRPLMS GGGKSGALNS VLNKTDGEWL FILDADAQLQ
SNVLLRAIAL ALHGGWSAVQ LRKSVVNCEL NQIASYQAME MAMDAVIQRG RLASGGVSEL
RGNGQLINRK VLECCGGFNE QTITDDLDLS FRFLLTRSPI VIMWDPPIQE EAVESLSALF
RQRKRWAEGG LQRFFDYWPL LISNRLSKFK KIDLSCFFLL QYVLPVVSLI DLIVSIILFE
TPLYWPLSIV AFGISSLAFW KGCSQNSEGP RLPSPNFINI LGATIYLAHW FIVIPFIVVK
MSLFRKTLIW EKTDHIGS
|
|---|
| |