Gene PMN2A_1256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1256 
Symbol 
ID3606650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1762518 
End bp1764215 
Gene Length1698 bp 
Protein Length565 aa 
Translation table11 
GC content32% 
IMG OID637688132 
ProductDNA polymerase III, tau subunit 
Protein accessionYP_292449 
Protein GI72383094 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.303373 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAACGA CTTATGAGCC ATTACATCAT AAATATCGCC CAACAAGCTT TGACGAACTA 
GTTGGGCAAG ATCCAATCAA GTCAACATTA AAACAGGCAT TAATTAGTGA TCGAATTGCC
CCTGCATATA TTTTTTCTGG ACCTCGAGGA ACAGGTAAAA CATCAAGCGC GCGCATTTTC
GCAAAGTCTT TAAATTGTTT AAAAAGTGAA AAAGCTACAA CCACGCCTTG CGGGCAATGT
GAACTCTGTA AGGGAATTAG CTCTGGCAAT GCATTGGATG TAATTGAAAT TGATGCAGCT
TCGAATACAG GTGTTGAAAA TATTCGTGAA TTAATAGAAA GGTCTAGATT TGCTCCTGCA
AAAGCTCGCT GGAAAGTTTA TGTCATAGAT GAATGCCATA TGCTTTCAAC CGCAGCCTTT
AATGCACTTT TAAAAACGTT AGAAGAACCT CCCCGTCAAG TCGTATTTAT TCTTGCGACA
ACTGATCCTC AACGCGTTTT ACCTACAATT CTTAGTAGAT GCATGCGGTT TGATTTTAGA
AGAATAGCTC TGCATGATTT AGAGAGTCAT TTAATCAATA TTGCTAAAAA AGAGGAAATT
CAAATCAACG AAGAAGCAAT ATCATTAATT GCCAAACACT CCCAAGGAGG GTTGAGAGAT
GCGGAAAGTT TACTTGATCA AGTCAGTTTA CTTCCTCCGC CAATAACTCA ATTAAACATA
ATTAATTTAA TAGGAGCTAT ACCAGAAGAA GAATTAATTA TATTAGCAAA GTCTTTAATA
ACTAAAGATC CGAATTCTAT TCTGAATATT TGTAATAGCC TAATAAATAA AGGGAAGGAG
CCAATTGCAA TTTTACAAGG AATAGCATCT ATATTAAGAG ATCTAGTTGT AACAAAAGTC
ACAAATAAAC CAACAAATTT ATGTAATATT TCCCAAGAGC ATAGTGAAAG TTTAAACTTC
TTAGCAACAT CTAGTAATCT TGATCAAATA CTCAACCTAC AGGCCAAGTT AAAAGGATCA
GAAAGTAATA TAAGAAACAG TAATCAACCA AACTTATGGC TAGAAATTCA TCTACTTGGA
ATGCTTTCCG ATGAAGTTTC CAAAGAAAAT AATAACATCA AACAATCCTT AGTTAAAACC
AAAATATCAG ATAACTCTGA ATCTGAAAAT ACAAATAATA CATCAAACAG CATAGTCCCT
AATACAGAGA AAGAACAAAT TAAAACAACA GCTTTTCTAG ACGAAACAAA AACTAGTCCA
ACTTTAAATC TTGATGATAT TTGGAAAAAA GTTATAGCTA TGTTAGAGCT TCCTTCAACA
AAGATGCTAC TTTCACAACA AGCTAAATTA ATCAATCTGA GTTCAGATTC TGCTGAAATA
GCAATTTCTG AAAAATGGAT AAATATGATT CAAAGTCGAA AAAATCTGAT TGAAGATGCT
TTTTATAAAG CGATAGGATC GTCAACTAAA GTTCTATTAA TACAACAAAA AGATAACTTT
TCAAATCATA ATAAAGTTGA AAATAATCTT CAAAAAATAG AACCAAAAAA TCAAATTAAA
GTTGATAGAG AGCCAAATAA AAATATTGTT AAAGAGGAGA AAATAGAGTC AAAAAATAAT
TTAAAGGTAA ATTCTATTGA TCAAAAAGCT AAGCAATTCG CAGACTTCTT TAATGGAGAA
ATTGTGAATC TTGAATGA
 
Protein sequence
MITTYEPLHH KYRPTSFDEL VGQDPIKSTL KQALISDRIA PAYIFSGPRG TGKTSSARIF 
AKSLNCLKSE KATTTPCGQC ELCKGISSGN ALDVIEIDAA SNTGVENIRE LIERSRFAPA
KARWKVYVID ECHMLSTAAF NALLKTLEEP PRQVVFILAT TDPQRVLPTI LSRCMRFDFR
RIALHDLESH LINIAKKEEI QINEEAISLI AKHSQGGLRD AESLLDQVSL LPPPITQLNI
INLIGAIPEE ELIILAKSLI TKDPNSILNI CNSLINKGKE PIAILQGIAS ILRDLVVTKV
TNKPTNLCNI SQEHSESLNF LATSSNLDQI LNLQAKLKGS ESNIRNSNQP NLWLEIHLLG
MLSDEVSKEN NNIKQSLVKT KISDNSESEN TNNTSNSIVP NTEKEQIKTT AFLDETKTSP
TLNLDDIWKK VIAMLELPST KMLLSQQAKL INLSSDSAEI AISEKWINMI QSRKNLIEDA
FYKAIGSSTK VLLIQQKDNF SNHNKVENNL QKIEPKNQIK VDREPNKNIV KEEKIESKNN
LKVNSIDQKA KQFADFFNGE IVNLE