Gene PMN2A_1252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1252 
Symbol 
ID3606646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand- 
Start bp1757588 
End bp1758625 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content38% 
IMG OID637688128 
Productaspartate semialdehyde dehydrogenase 
Protein accessionYP_292445 
Protein GI72383090 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAACCAA AATCTCTTCT TCCAAATAGA CCACTTACAG TTGCGATTCT TGGATCGAGT 
GGAGCTGTAG GAAAGGAATT ATTGGCTTTG CTTGAAGAGA GATCATTCCC TGTTGGAAAA 
TTAATTTTAC TAGCCTCCCA TCGCTCAGCA GGGGACATTC AGAGTTTTTG TGGAACTGAG 
GTGAAAGTCG AAGAGACAAC TAAAGATAGT TTTAAAAATG TAGATTTAAT TTTGGCTTCA 
GCTGGTAGTT CAATATCTCG TAAATGGAAA GATACAATTC AAAGTTCTGG AGCTTTGATG 
ATTGATAACT CTAGTGCATT TCGAATGGAC GAGAATGTTC CTTTGATCGT TCCAGAAGTT 
AATCCTTCTG ATGCTATTAA GCACAAAGGT GTAATTTCTA ATCCGAATTG CACGACTATT 
TTATTAGCGT TGGTTCTATC TCCATTGACT AGGCATATCC CCATTAAGAG GATCGTTGTA 
TCAACCTATC AATCCGCTAG TGGTGCAGGT GCAATGGCAA TGGAAGAATT AGAAAAATTA 
AGCCAAGAAG TTTTAGATGG AAAAACTCCA AAAAGTAAAG TTCTTCCGTA TTCTTTGGCG 
TTTAATCTTT TTTTGCATAA TTCACCTTTG CAATCGAATA ATTATTGCGA GGAAGAGATG 
AAAATGGTTA ATGAAACCCG AAAGATTCTT GGAGATCCCG AACTTTCATT GACCGCAACA 
TGTGTAAGAG TCCCAGTCTT AAGAGCCCAT TCTGAATCGG TCAATATTGA ATTTACAAAG 
CCTTTTCCAG TAAAAGAAGC TTATGAGATT TTGGAGGCTT CACCGGGAGT TGAAATACTT 
GAGGACTTGG AAAATAATCG TTTTCCGATG CCTCAAGATG TAACTGGCAG AGATCCAATA 
TCAGTTGGTC GAATAAGGCA AGATATAAGT AACCCGAATG CTTTAGAACT ATGGTTATGT 
GGAGATCAAA TCCGCAAGGG TGCAGCACTT AATGCAGTGC AGATTGCTGA ACTTCTACTG 
CCAAAGAATT ATGAATAA
 
Protein sequence
MKPKSLLPNR PLTVAILGSS GAVGKELLAL LEERSFPVGK LILLASHRSA GDIQSFCGTE 
VKVEETTKDS FKNVDLILAS AGSSISRKWK DTIQSSGALM IDNSSAFRMD ENVPLIVPEV 
NPSDAIKHKG VISNPNCTTI LLALVLSPLT RHIPIKRIVV STYQSASGAG AMAMEELEKL 
SQEVLDGKTP KSKVLPYSLA FNLFLHNSPL QSNNYCEEEM KMVNETRKIL GDPELSLTAT 
CVRVPVLRAH SESVNIEFTK PFPVKEAYEI LEASPGVEIL EDLENNRFPM PQDVTGRDPI 
SVGRIRQDIS NPNALELWLC GDQIRKGAAL NAVQIAELLL PKNYE