Gene PMN2A_1250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1250 
Symbol 
ID3606644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1754664 
End bp1756598 
Gene Length1935 bp 
Protein Length644 aa 
Translation table11 
GC content41% 
IMG OID637688126 
Producthypothetical protein 
Protein accessionYP_292443 
Protein GI72383088 
COG category[R] General function prediction only 
COG ID[COG0595] Predicted hydrolase of the metallo-beta-lactamase superfamily 
TIGRFAM ID[TIGR00649] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTCTC AAGGTTCAAA AAATAATCAA ACCAAATCTC CTTGTTTGAG GATTATTCCC 
TTAGGCGGCC TCGGAGAAAT CGGTAAAAAT ACTTGCGTCT TTGAATACGG AGACGACATC
ATGATTCTTG ATGCTGGTCT TGCTTTCCCA ACTGATGGGA TGCATGGAGT AAATGTTGTC
ATGCCAGACA CTACTTATCT ACGAGAAAAT CAAAATCGAA TAAGAGGTTT GGTGGTTACT
CATGGGCATG AGGATCATAT TGGTGGAATT TCTCATCATT TAAAGAACTT TAATATTCCA
ATTGTTTACG GCCCTCCCCT CGCTATGTCT ATGCTGAGGG GGAAAATGGA GGAAGCTGGA
GTTGCTGATC GGACAACAAT ACAAGTATGT GGACCAAGAG AAGTTATTAA AGTTGGGCAA
CATTTTTCAG TTGAATTTGT AAGAAATACA CATTCAATTT CTGATAGTTA TTCCTTTGCA
GTTACGACTC CAGTGGGAGT AGTATTTTTC ACTGGAGATT TTAAGTTCGA CCATACCCCA
CCTGACGGAC AGCCTGCAGA TTTAGCCAGG ATGGCTCACT ATGGAGATAA AGGTGTTCTT
TGCCTTCTAT CTGATTCAAC CAACTCTGAA GTTACAGGAT TCACGCCCTC TGAATATTCT
GTTTTTCCAA ATTTAGATAG ATACATTGCT ACTGCTGAAG GCAGAGTTAT GGTTACTACT
TTTGCTAGTT CAACTCATCG TGTAGCGATG CTTTTGGAGC TAGCAATGAA AAACGGTAGA
AAGGTTGGCT TGCTAGGTCG TTCAATGCTG AATGTGGTTG GTAAGGCAAG GGAACTTGGT
TATATGCGTT TTCCTGATGA TTTATTTTTT CCTATTAAAC AGATCAGAGA TTTGCCTGAT
AGAGAGACTT TTTTATTGAT GACAGGTAGT CAAGGAGAAT CAATGGCTGC TTTAAGCCGT
ATTGCTAGAG GCGAGCATCA ACATGTTCAA TTGAAAACTA GTGATACTGT TATTTTTTCT
GCTAGCCCTA TTCCTGGGAA TACTATTTCT GTGATGCATA CGATTGATAA ATTAATCAAA
CTGGGTGCAA AAGTAATTTA TGGCAAAGAT AAGGGGATTC ATGTTTCAGG CCATGGATGC
CAAGAAGATC AAAAATGGAT GCTTGGATTA ACAAGACCTA AATACTTCAT TCCTGTTCAT
GGTGAGTACA GAATGCAAGT TTTACATGGG AAAACTGCTG TCTCAATGGG GGTGCATCCA
GAGAATGTAT TGGTGATGGA AAATGGGGAC GTTGCTGAAT TAAGACCAGA TTCTCTATTG
CAAGGCTCAC CAGTTAAATC TGGAGTGGAA TTACTCGATT CTTCTAGAAC AGGGATTGTG
GATACTCGAG TATTAAAAGA ACGTCAGCAA CTTGCTGATG ATGGAGTTAT TACCGTTCTT
ACTCCAATTA GTACTGATGG GGTGATGGTT GCACCACCTA GGGTAAATCT TCGTGGTGTT
ATCACTAATG TTGATGCCAA AACCATGGTT AATTGGACTG AAAGAGAGAT TAATTGGGTC
TTAGAAAATC GATGGAAACA GCTCGTTCTT AAGACCGGGG GAAAATCAGT TGAGGTCGAT
TGGATAGGAT TGCAAAGAGA GGTTGAATCA GGATTATCTC GTCGGTTGAG AAGAGAGGTT
CAAGCGGAGC CTTTAGTTCT TTGCCTTGTT CAACCTGCTC CAGGAGGAAC TCGCGCATAT
AAACCTCAAC TTGATCAACA GCCAGATTCA CGACAAGTAG TTAAGAAAAC TGCTGATAAA
GCCCCTAAGA CGACAAAGGC ATCCGTAGCA AATCAAGAAA CAAGTTCACC AGCAGAACAA
AAAACAAATA CGGAACCTAA TGCTGAGGAA ATGCCCACAG GAAGAACAAG ACGTCGCAGA
TCAGCAATTA GCTGA
 
Protein sequence
MNSQGSKNNQ TKSPCLRIIP LGGLGEIGKN TCVFEYGDDI MILDAGLAFP TDGMHGVNVV 
MPDTTYLREN QNRIRGLVVT HGHEDHIGGI SHHLKNFNIP IVYGPPLAMS MLRGKMEEAG
VADRTTIQVC GPREVIKVGQ HFSVEFVRNT HSISDSYSFA VTTPVGVVFF TGDFKFDHTP
PDGQPADLAR MAHYGDKGVL CLLSDSTNSE VTGFTPSEYS VFPNLDRYIA TAEGRVMVTT
FASSTHRVAM LLELAMKNGR KVGLLGRSML NVVGKARELG YMRFPDDLFF PIKQIRDLPD
RETFLLMTGS QGESMAALSR IARGEHQHVQ LKTSDTVIFS ASPIPGNTIS VMHTIDKLIK
LGAKVIYGKD KGIHVSGHGC QEDQKWMLGL TRPKYFIPVH GEYRMQVLHG KTAVSMGVHP
ENVLVMENGD VAELRPDSLL QGSPVKSGVE LLDSSRTGIV DTRVLKERQQ LADDGVITVL
TPISTDGVMV APPRVNLRGV ITNVDAKTMV NWTEREINWV LENRWKQLVL KTGGKSVEVD
WIGLQREVES GLSRRLRREV QAEPLVLCLV QPAPGGTRAY KPQLDQQPDS RQVVKKTADK
APKTTKASVA NQETSSPAEQ KTNTEPNAEE MPTGRTRRRR SAIS