Gene PMN2A_1237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1237 
Symbol 
ID3606630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1738301 
End bp1739191 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content31% 
IMG OID637688112 
Productglucose-1-phosphate thymidylyltransferase 
Protein accessionYP_292430 
Protein GI72383075 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1209] dTDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01207] glucose-1-phosphate thymidylyltransferase, short form 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.783874 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAAAGTC AATCTCAACG TAAAGGAATC ATTATAGCTG GAGGGATTGG TAAAAGGCTT 
TTACCTTCTA CTTACTCTAC TAATAAGCAT CTGTTTTTGT TATATGATAA GCCAATGATT
TACTATCCAT TGACTACATT AATGTTGGGT GGCATCAAGG ATATTTTAAT TATTACATTA
AAAAGTTCAA TAGAATCATA CAATAAGCTT TTAGGTGATG GTGGTAAGTG GGGTATAAAT
ATACAATATT CAATTCAAGA GGAACCAAAA GGTATTGCTG ATGCAATATT ATTGGGTGAA
GAATTTGTTG GTCAAAGTCA TACGGTAATT ATTTTAGGAG ATAATATCTT TCATGGTAAT
AATTTATACA ATCTTTGGAA AATTTCAGAT TCATTTGATA AAGGTTCTAC TATATTCGCC
TATCAAGTAA GTGATCCGGA GCGTTATGGA GTTGTAGATA TTGATACTAA TGGAGATGTT
CTCACTATAG ATGAAAAACC GAAGATTCCA AAGAGTAATT TTGCTATTAC TGGATTATAC
TTTTACGATA ACTCTGTTTT TGATAGAATT AGGAAATTAA ATTATTCATC TAGAAACGAG
CTAGAAGTAA CTTCACTAAA TAATAGTTAT ATAAGGGATA ATCTCCTTAA AGTTGAACTG
CTTGGGCGAG GTATGTCATG GTTTGATGCT GGTACTTTTG ATTCTTTCCT TGATGCATCA
TTATATATAA AAACAATTCA ATCAAGACAA GGATTAATGA TAGGATGTCC AGAAGAAGTT
GCTTTTAGAC AAGGTTGGAT TGATAGGAAT CAAGTTGTTA ATCTTGCAAA CACTTTGGAA
TATTCAAGAT ATGGAGAGTA TCTTAATGAA ATTTTAGAAA GCAATAAATA A
 
Protein sequence
MQSQSQRKGI IIAGGIGKRL LPSTYSTNKH LFLLYDKPMI YYPLTTLMLG GIKDILIITL 
KSSIESYNKL LGDGGKWGIN IQYSIQEEPK GIADAILLGE EFVGQSHTVI ILGDNIFHGN
NLYNLWKISD SFDKGSTIFA YQVSDPERYG VVDIDTNGDV LTIDEKPKIP KSNFAITGLY
FYDNSVFDRI RKLNYSSRNE LEVTSLNNSY IRDNLLKVEL LGRGMSWFDA GTFDSFLDAS
LYIKTIQSRQ GLMIGCPEEV AFRQGWIDRN QVVNLANTLE YSRYGEYLNE ILESNK