Gene PMN2A_1229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1229 
Symbol 
ID3606622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1723824 
End bp1727483 
Gene Length3660 bp 
Protein Length1219 aa 
Translation table11 
GC content29% 
IMG OID637688104 
Productputative glycosyltransferase 
Protein accessionYP_292422 
Protein GI72383067 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.197488 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAATTG CTATTGACCT TTCAGGTGTT CAAAGTTTAG GAAGTAGAAA AAGAGGTATA 
GGAAGATATT CTTATGAAAT AATCTCGAAT ATTTTAGATA ATTTTCCAGA GAATGAATAT
GTTCTGATTG GAAATGCTTG TCTTTTAGAT ATTAGTTCTG ATTTTAGAAA GTACCTAAGT
CGGAGTAATA TTAATTATAT AAATTGGTAT TCTTTAGCAC CTCTAGATTA TATTTCTAAA
AATGATAATG CTTTAAATAT TGCAAGATAT TTAAGATCAT ATACATTCAA TCGTGTTTTT
CCTGATGTTA TTCTTTTAAC TAGTTTTTTT GAAGGGTATA CAGACAATTG CTTTACAGAA
TTTGATAACG ATATTCTTGC AGCCCCAGTA TTATCGATCT TCTATGATTT AATTCCGTTA
TTACATCCAG ATCTATACTT AAATTCTAAT CCAGCTTTTA AAGAATTTTA TTTAAATAAA
ATTGATAAGT TAAAAACATT AGATGGATTA CTTTCTATTT CGAAATCATC TAAAAATGAA
GCAATTAAGT ATTTAGGTTA TGCGGAAGAT AAAGTTTATA ATATTTCCTC TGCTTGTAAT
AGGGATATAT TTAATATAAA GAAAGTTGAG ACTGATAAAT CAACACACAG TGTTTTAGAT
ACCCTTGATC ATTATATTTT ATATTCTGGG GCAAGCGATC CTAGAAAAAA TATTAAAGGT
TTGTTAAAGG CATATTCAAA ACTTCCTTTT GAGGTTCTCT TAAAATACAA ACTTGTTTTT
TCTGGAAAGT TATTACCTTC AGAAACTGAT TTAATTCATG GTTGGATAAA AGAGTTCTCT
ATCAATAAAA AAAGTGTAAT TCTTTTAGGC TATGTTTCAG ATAAAGATTT AGTTTATTTA
TATCAAAACT GCGCTTTATT TGTTTTTCCA TCTTTCCATG AGGGTTTCGG TCTGCCTATT
CTAGAGGCAA TGTCATGTGG AGCTCCTTCA ATAGCATCAA ACTGTACAAG TATTCCAGAA
ATTATTGGCG ATGCGAATGC AATGTTTGAC CCATATGACA CTGATTCTAT TAAGAATCTT
ATTCAGAAAG CGTTAACTGA TATTGTTTTT AGAAATTCTT TAATAAAAAA CGCAAGTTAC
CAAGCACAGA AATTTTCTTG GTTCGACACC AGTAGAAAAG TCTTAGAAGC TTGTGAAAAT
ATTATTAATG ACAATCCGAA AGATTATTCT AATTGTAATT GGGAATATAT AAATTATAAA
AATAATAATA GCTATAATAT TTTATTAAGT AAAATAAAAA ATGATAAGAA CCTTCAGGCT
AATTTAAGTC AAAATCTCGC AGACCAAATT GCATCTTCAA TTGATTTAGT CAATTTAGAA
ACAGACTTTA TATCACGTTC TTTGATTCCT TTAGATTCTC CCTTTTCTTG GAGAGTGGAA
GGTCCATTTG ATTCAAATTA TAGCCTCGCA ATTTTAAATA GATCTTTTGT TCAATCTCTT
ACTAAAATCA TAGAAAATGT AACGATACAT AATACGGAGG GACCTGGTGA TTATGTTCCT
AATATCAAAT TTATTAAGCA ATATCCTTCT ATATATAAAC TATATAAACA ATCTTTGGAA
TCGACTGAAT CTTCAATAGT ATCTAGCAGA AATTTATATC CTCCGCGAGT AGCGGACTTG
CAATCAATAA TAAATCTTCT TCACTCATAT GGATGGGAGG AATCTGAATT TCCTCAGGAA
TGGGTTGTTG AATTTAATAC TTATTTGCAG GGTGTTTCAG TAATGTCTTC TCAAGTAAAA
AAGATTTTAA TAGATAATGG CGTGCGAATT CCCATTAGTG TTTGTGGCCT TGGTATAGAT
CATTTAGAGG ATTTAGAAAG TGATAGGAAT TTTTCGCTAA ACTCCAATAA ATTTAGGTTT
CTCCACGTAT CTTCATGCTT TCCACGTAAA GGAATTGATA TCTTATTAAG AGCTTATGGC
CAGGCTTTTA ATTCTTATGA TGACGTTACT TTAATTATAA AAACATTCAA GAATTCCCAT
AATAATGTAG ATCAAATCCT AAAGAAGGAG AAATCTATAA ATTCTAAATA TCCAGATGTA
ATGATTATCA ACGAGGATTT AAGTGATTCA CAGTTAAAAG CATTATATTT TAGCTCAGAT
GCATTAGTAG CACCAAGCCG GGGAGAAGGA TTTGGTTTAC CCATAGCTGA GGCAATGTTT
CTAGATTTGC CTGTTATAAC TACAGCTTGG GGAGGTCAAA CTGATTTCTG TAATCATGAA
AATAGCTGGC TAATTGATTA TGAGTTTTTA TCAGCAAAAA CACATTTTGA TTTAGGCATG
TCTTATTGGG CAGAGCCATC TTGTTCTCAC TTGTCGGAAC TTATGAAAGA ATTATTTCAT
TCAAATAAGT TAAGTTTAAG GTCTAAAATT TCTAAAGCTA AATCAGATAT TGAAAAATTT
ACCTGGAAAA ATGTGGCACT TAAGAATCTA GATTTTTCAC AAAATATTTT GAATAATATG
CAAAGTATTC ATCCACGTAT AGGATGGATT ACATCCTGGG GAACTAGATG TGGTATTGCA
TCTTACTCAA AAAATTTAAT AGATAATATT TTCTCAAGAG TAACAATATT TACTCCAATT
TCATCACAAA AAATTAGTAC AACTTACGAA ACAATTCAGT GTTGGGAATT AGATAATGAT
ATATCGCAAG ATTTAAATCA ATTATTTAAT GACGTTATTA ATGCCCAGAT AACTTCTTTA
GTAATACAAT TTAATTATGG ATTTTTTAAT TTCTCTGAAT TATCTAGTTT CATAGATAAA
GTTTCATCAC ATAAAATCAA TATAATCTTA TTTATGCATT CGACTCTTGA TCCAATTGGG
AATAATAAAA AACGTATAGA GAACTTAATT CCTTCTCTAT TTAAATGTAG CAGAATATTA
GTCCATACAT TAACAGATCT GAATCGCTTA AAGCTTTTAG GCCTGAAGGA AAATGTAAGT
TTATTTCCGC ATGGCATAAA ATATGTTCCC ATTAATCATG AATTATCTAA AGACTTTTCT
AGAGCCAACT TATTTAGTCA TAAACATAAA TTAAGAATAG CTTCATATGG TTTTTGTTTG
CCTAATAAGG GTTTCAATGA ATTGATTAAG GCAGTCAAAA TTTTATCTGA TAGAAACATA
TATTTAGAAT TAAATTTGTT TACGGCAATC TATAATGATT CCTTTACTTA TGTTTACAAT
GAGTTGGTAG ATTTAGTTCA TAAGTTGAAT ATTAGAGATA TAGTTAACAT AAACACTGAA
TATATGGCCG ATGAACAAAC TGTAAAAAAT TTGTCTTCGC AAGATTTGAT TGTTTTTCCT
TATCAACATA CCAACGAATC TTCAAGCGCT TCAGTGAGAC AAGCATTAGC GGCTTTAAAA
CCAACTTTAG TTACTCCCAA TCCAATATTT AATGATATTT CTGATTGCAT TGAATACCTA
CCTGGGTTTA CTTCTGATGA AATTGCCAAT GGAATTATTA ATTGGATCAA GAGATCAAAA
AATAAAAAAG AAGCTGAAAT TCTACAATAT AATAAACAAA AATTTATTAA TAATTTTAAG
TTTTCTAGAC TGGGATTTCG TTTATTTAAT ATGATTAATA GTCTAGAAAT TAATGAATAG
 
Protein sequence
MRIAIDLSGV QSLGSRKRGI GRYSYEIISN ILDNFPENEY VLIGNACLLD ISSDFRKYLS 
RSNINYINWY SLAPLDYISK NDNALNIARY LRSYTFNRVF PDVILLTSFF EGYTDNCFTE
FDNDILAAPV LSIFYDLIPL LHPDLYLNSN PAFKEFYLNK IDKLKTLDGL LSISKSSKNE
AIKYLGYAED KVYNISSACN RDIFNIKKVE TDKSTHSVLD TLDHYILYSG ASDPRKNIKG
LLKAYSKLPF EVLLKYKLVF SGKLLPSETD LIHGWIKEFS INKKSVILLG YVSDKDLVYL
YQNCALFVFP SFHEGFGLPI LEAMSCGAPS IASNCTSIPE IIGDANAMFD PYDTDSIKNL
IQKALTDIVF RNSLIKNASY QAQKFSWFDT SRKVLEACEN IINDNPKDYS NCNWEYINYK
NNNSYNILLS KIKNDKNLQA NLSQNLADQI ASSIDLVNLE TDFISRSLIP LDSPFSWRVE
GPFDSNYSLA ILNRSFVQSL TKIIENVTIH NTEGPGDYVP NIKFIKQYPS IYKLYKQSLE
STESSIVSSR NLYPPRVADL QSIINLLHSY GWEESEFPQE WVVEFNTYLQ GVSVMSSQVK
KILIDNGVRI PISVCGLGID HLEDLESDRN FSLNSNKFRF LHVSSCFPRK GIDILLRAYG
QAFNSYDDVT LIIKTFKNSH NNVDQILKKE KSINSKYPDV MIINEDLSDS QLKALYFSSD
ALVAPSRGEG FGLPIAEAMF LDLPVITTAW GGQTDFCNHE NSWLIDYEFL SAKTHFDLGM
SYWAEPSCSH LSELMKELFH SNKLSLRSKI SKAKSDIEKF TWKNVALKNL DFSQNILNNM
QSIHPRIGWI TSWGTRCGIA SYSKNLIDNI FSRVTIFTPI SSQKISTTYE TIQCWELDND
ISQDLNQLFN DVINAQITSL VIQFNYGFFN FSELSSFIDK VSSHKINIIL FMHSTLDPIG
NNKKRIENLI PSLFKCSRIL VHTLTDLNRL KLLGLKENVS LFPHGIKYVP INHELSKDFS
RANLFSHKHK LRIASYGFCL PNKGFNELIK AVKILSDRNI YLELNLFTAI YNDSFTYVYN
ELVDLVHKLN IRDIVNINTE YMADEQTVKN LSSQDLIVFP YQHTNESSSA SVRQALAALK
PTLVTPNPIF NDISDCIEYL PGFTSDEIAN GIINWIKRSK NKKEAEILQY NKQKFINNFK
FSRLGFRLFN MINSLEINE