Gene PMN2A_1221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1221 
Symbol 
ID3606614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1709438 
End bp1710505 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content36% 
IMG OID637688096 
ProductGDP-mannose 4,6-dehydratase 
Protein accessionYP_292414 
Protein GI72383059 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1089] GDP-D-mannose dehydratase 
TIGRFAM ID[TIGR01472] GDP-mannose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.155645 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCCCCC AAAAAACTGC TCTTATCACA GGCATCACAG GGCAAGATGG TAGTTACCTA 
GCAGAATTAC TAATATCAAA AGGATATGAA GTACATGGCC TTGTTAGAAG ATCAAGTCAA
GTAAATACAC ATCTAATCGA TCATTTGATA AGTGATAATG AAGAGAAAAA AAAAGTTCAT
TTACACTATG GAGATCTTAC ACACAGCACA AATTTAGTAA GAATTATAAA AGAGATTGAG
CCAGATGAGA TCTATAATTT AGGTGCTCAA AGTCATGTAA AAGTAAGCTT TGAATCGCCA
GAGTACACAG CTCAAACTGA TGCACTGGGA CCTTTGCGAA TACTTGAAGC TGTAAGGATC
CTTGGATTAA CTAAAAAGAC TAGAATTTAT CAAGCCAGTA CGTCCGAATT ATATGGCCTA
ATACAAGAAA CACCTCAAAA AGAGACCACA CCTTTTTATC CAAGAAGTCC TTACGGAGTA
GCAAAATTAT ATGCTTATTG GATAACTATT AACTACCGTG AGTCTTATGG AATATATGCA
TGTAACGGCA TACTTTTCAA TCATGAGTCT CCAAGAAGAG GTGAAACTTT CGTAACAAGG
AAAATCACTA GAGGTTTAAC AAGAATAAAT TTAGGCTTAG AAAAATGCCT AGAGATGGGA
AACATTGATT CTCTAAGGGA CTGGGGACAT GCAAAAGACT ATGTGGAGAT GCAATGGAGA
ATGCTTCAAC AAGAGACACC TGAAGATTAT GTGATTGCAA CTGGCCAAAC AACATCAGTT
AGAAATTTTA TAGAAAAATC ATCTATTGCT CTGGGCTGGG GCGGAATCGA ATGGGATGGA
GAAAATGAGA AAGAAGTTGG CAGAAGAAAA GACAATGGAG ATCTGGTAAT AAAAATCAAT
CCAGAGTTTT ACAGGCCTGC CGAAGTAGAG CAATTATTAG GTGATGCGAC AAAAGCACAT
AACAATCTCG GATGGAAGCC GAAAATAAAA ATAGACGAAT TAATAATGGA AATGATCAAT
GCTGATAAAT TAATTGCTGA ACTAGAACTA AAACAGATGT CTATTTAA
 
Protein sequence
MSPQKTALIT GITGQDGSYL AELLISKGYE VHGLVRRSSQ VNTHLIDHLI SDNEEKKKVH 
LHYGDLTHST NLVRIIKEIE PDEIYNLGAQ SHVKVSFESP EYTAQTDALG PLRILEAVRI
LGLTKKTRIY QASTSELYGL IQETPQKETT PFYPRSPYGV AKLYAYWITI NYRESYGIYA
CNGILFNHES PRRGETFVTR KITRGLTRIN LGLEKCLEMG NIDSLRDWGH AKDYVEMQWR
MLQQETPEDY VIATGQTTSV RNFIEKSSIA LGWGGIEWDG ENEKEVGRRK DNGDLVIKIN
PEFYRPAEVE QLLGDATKAH NNLGWKPKIK IDELIMEMIN ADKLIAELEL KQMSI