Gene PMN2A_1218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1218 
Symbol 
ID3606611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1704245 
End bp1705024 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content29% 
IMG OID637688093 
Productputative ABC-type polysaccharide/polyol phosphate export systems permease component 
Protein accessionYP_292411 
Protein GI72383056 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.990833 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAATTG ATGATTTTAA GTTTGCTATA AATAACAGAA GAGTATGGTG GTATACCGCT 
ACATCTAGAA CAAGAGCAAG ATTTGCAAGA ACTACTCTTG GTAGCTTTTG GCTAGGATTT
TCAAACTTAC TGTCAATCTC AACTTTAGGT TTTGTGTATG GAACTGTTTT TAAAGTTCAA
GACTTCAGTT CGTATTTTGT ATATCTAGGA ATTGGATTGG TTATTTGGAA TACAATTTCT
TCATCTGTTT GTATGGCTCC TAATCTTTTT TCTAATAATT CCTCAAATAT AAAAAATATG
AACTTAAGGC CATTATTTTA TACCTTAGAA GAATGGGCAT TTCAGATTCA GACTTTTTTT
CAGTCTTTCT TGCTGGTTTT TATTGTACTT TTACTTTTTA AACCTGTATT ACTAATAAAT
ATATGTACTG CGTCATGGAT TCCCATGCTC AATTTTGTTT TATTCATTTA TTGGTTTCCT
TTGCTTCTTT GTTTGATCAG TATTAGATAT ACTGATCTGG CTCAACTAGT TCCAATAATT
ATGCAAATAG TCTTTTTAAC ATCTCCAATA TTATACAGAA AAGAGAGTTT AGGTAATATA
GGCTGGATAA CTGATGTTAA TTTATTTTAT AGAATTTTAG ACCCTTTAAG AGTCAGCATT
AATAGTGGAT TTGTTAATTA TAGAGAATCA TTATTAATAC TAATTATTAA CTTTGTAGGA
ATATACTTCT CTCTAAATTT TCTAAAAAAG AGTAGTGGAA AATTACCTTT CTTGGTTTGA
 
Protein sequence
MIIDDFKFAI NNRRVWWYTA TSRTRARFAR TTLGSFWLGF SNLLSISTLG FVYGTVFKVQ 
DFSSYFVYLG IGLVIWNTIS SSVCMAPNLF SNNSSNIKNM NLRPLFYTLE EWAFQIQTFF
QSFLLVFIVL LLFKPVLLIN ICTASWIPML NFVLFIYWFP LLLCLISIRY TDLAQLVPII
MQIVFLTSPI LYRKESLGNI GWITDVNLFY RILDPLRVSI NSGFVNYRES LLILIINFVG
IYFSLNFLKK SSGKLPFLV