Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_1218 |
Symbol | |
ID | 3606611 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | - |
Start bp | 1704245 |
End bp | 1705024 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 637688093 |
Product | putative ABC-type polysaccharide/polyol phosphate export systems permease component |
Protein accession | YP_292411 |
Protein GI | 72383056 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.990833 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAATTG ATGATTTTAA GTTTGCTATA AATAACAGAA GAGTATGGTG GTATACCGCT ACATCTAGAA CAAGAGCAAG ATTTGCAAGA ACTACTCTTG GTAGCTTTTG GCTAGGATTT TCAAACTTAC TGTCAATCTC AACTTTAGGT TTTGTGTATG GAACTGTTTT TAAAGTTCAA GACTTCAGTT CGTATTTTGT ATATCTAGGA ATTGGATTGG TTATTTGGAA TACAATTTCT TCATCTGTTT GTATGGCTCC TAATCTTTTT TCTAATAATT CCTCAAATAT AAAAAATATG AACTTAAGGC CATTATTTTA TACCTTAGAA GAATGGGCAT TTCAGATTCA GACTTTTTTT CAGTCTTTCT TGCTGGTTTT TATTGTACTT TTACTTTTTA AACCTGTATT ACTAATAAAT ATATGTACTG CGTCATGGAT TCCCATGCTC AATTTTGTTT TATTCATTTA TTGGTTTCCT TTGCTTCTTT GTTTGATCAG TATTAGATAT ACTGATCTGG CTCAACTAGT TCCAATAATT ATGCAAATAG TCTTTTTAAC ATCTCCAATA TTATACAGAA AAGAGAGTTT AGGTAATATA GGCTGGATAA CTGATGTTAA TTTATTTTAT AGAATTTTAG ACCCTTTAAG AGTCAGCATT AATAGTGGAT TTGTTAATTA TAGAGAATCA TTATTAATAC TAATTATTAA CTTTGTAGGA ATATACTTCT CTCTAAATTT TCTAAAAAAG AGTAGTGGAA AATTACCTTT CTTGGTTTGA
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Protein sequence | MIIDDFKFAI NNRRVWWYTA TSRTRARFAR TTLGSFWLGF SNLLSISTLG FVYGTVFKVQ DFSSYFVYLG IGLVIWNTIS SSVCMAPNLF SNNSSNIKNM NLRPLFYTLE EWAFQIQTFF QSFLLVFIVL LLFKPVLLIN ICTASWIPML NFVLFIYWFP LLLCLISIRY TDLAQLVPII MQIVFLTSPI LYRKESLGNI GWITDVNLFY RILDPLRVSI NSGFVNYRES LLILIINFVG IYFSLNFLKK SSGKLPFLV
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