Gene PMN2A_1214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1214 
SymbolmiaA 
ID3606607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1700830 
End bp1701729 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content34% 
IMG OID637688089 
ProducttRNA delta(2)-isopentenylpyrophosphate transferase 
Protein accessionYP_292407 
Protein GI72383052 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase 
TIGRFAM ID[TIGR00174] tRNA isopentenyltransferase (miaA) 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACCCA ATAAACCTCT TGTCGTAGCC CTTATGGGCC CAACTGCAAG TGGTAAAACT 
GAACTTGCGA TTGATATTGC AAAAAAAATC AATTCTAATA TTCACAATAT TGATTCTCGC
CAAATTTATA TTGATATGGA TATTGGCACC GCAAAGCCAA CAGCAGTTCA ACAAAGCCAA
GTAAACCATT TCCTTATTGA TATTTGCTTG CCATCTAAAC CAATCAATCT TCATGATTTT
CAATCCATAG CCAAAACATC CATTGAGAGA GATTTAGAAA AAAAGGGTTT AACTTTACTT
GTAGGAGGAA GTGGTTTATA TCTGCAAGCC TTAATTGGAG GACTTAATCC TCCAGCGGTA
CCTCCTCAAA AATTCTTAAG AGATCAACTT AAAAAAATCG ATAAAGCCGA ACGACACAAA
TTATTAAAGC TTTGTGACCC TTTCTCAGCG CAGAGAATAC ATCCAGAAGA CTCAATAAGA
ATAATTCGTG CTCTTGAAGT TTTTTATGCA ACAGGAAGAA TGTTTTCGAA GGCTAAAAAC
ATGAGGCCTA CTCCTTGGAG AGTTTTGGAA CTTGGATTAA ATCCTGAAAA TTTAACCAGT
AGAATTCAAC TTAGAACTAG AGAAATGTAT AAAAAAGGGT TAGTAGAAGA AACAGGAGAT
TTGATCAATA AATACGGAAA TAATTTACAG TTGCTTAAAA CTATTGGATA TGGTGAAGCA
AGGTCTATGA TTAATGGAAA GATTAATTAT GAGGAGGCTT TAGAAATAAC AATAAAACGA
ACTTGCCAAT TAGCCAAAAG ACAAAAAACT TGGTTTAGAA ATAAGCATAA TTCTAAATGG
CTAAATGATG AGAATGCATT ACCCGAAGCT TTAGCTTCTA TCTATGAGTT TCTTGGTTGA
 
Protein sequence
MQPNKPLVVA LMGPTASGKT ELAIDIAKKI NSNIHNIDSR QIYIDMDIGT AKPTAVQQSQ 
VNHFLIDICL PSKPINLHDF QSIAKTSIER DLEKKGLTLL VGGSGLYLQA LIGGLNPPAV
PPQKFLRDQL KKIDKAERHK LLKLCDPFSA QRIHPEDSIR IIRALEVFYA TGRMFSKAKN
MRPTPWRVLE LGLNPENLTS RIQLRTREMY KKGLVEETGD LINKYGNNLQ LLKTIGYGEA
RSMINGKINY EEALEITIKR TCQLAKRQKT WFRNKHNSKW LNDENALPEA LASIYEFLG