Gene PMN2A_1213 details

Gene Information

• Locus tag: PMN2A_1213
• Symbol: gyrB
• ID: 3606606
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. NATL2A
• Kingdom: Bacteria
• Replicon accession: NC_007335
• Strand: -
• Start bp: 1698691
• End bp: 1700658
• Gene Length: 1968 bp
• Protein Length: 655 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 637688088
• Product: DNA gyrase subunit B
• Protein accession: YP_292406
• Protein GI: 72383051
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
• TIGRFAM ID: [TIGR01059] DNA gyrase, B subunit

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTAAAG ATTCAAAAGT CCAAGCGGCT TATGGTGCTG AGCAGATCCA AGTTCTTGAA 
GGCTTGGAAC CTGTAAGAAA GCGGCCTGGA ATGTATATAG GTTCAACAGG CTCTAAAGGA 
CTTCATCATC TTGTGTATGA AGTTGTTGAT AATGCTGTAG ACGAGGCACT AGCTGGTCAC 
TGTGATCAAA TCACAATATT GCTTTGTGAG GATGGTTCAG CATCAGTATC AGACAATGGT 
CGGGGAATTC CAACTGACTT ACATCCTCGC ACTGGTAAAA GTGCTCTTGA AACCGTTCTA 
ACTGTTTTGC ATGCTGGTGG CAAATTTGGA AGCGGTGGTT ATAAGGTTTC TGGAGGTTTG 
CATGGTGTTG GAATATCGGT TGTAAATGCT TTAAGTGAAT GGGTGGAAGT AACAGTTAGG 
AGGCAACAAC AAGTTCATTT TCAGCGGTTC GAAAGAGGCG CATCAATTGG GAGTCTAAAG 
TCTGAGAATC TTTCGAAATC AGATAAAAAT TTAACTGGTA CTACTGTTTG CTTTAAACCT 
GATGATCAAA TTTTTACGGA TGGCATATCG TTTGAATACG GAATTTTATC ATCGAGACTA 
CGAGAACTAG CCTATTTAAA TGGAGGGGTT CGTATCGTTT TTCGTGACGA GAGAAAGCAA 
TCGAATGATT CTTCGCAAAC TCCATATGAA GAAGTTTATT TTTACGAAGG TGGAATAAAA 
GAATATGTAG AGTATATGAC TAAAGCAAAA GACTCATTAC ATCCAGAGAT TATTTATGTC 
AACTCAGAAA AAGATGGTGT TCAAGTAGAA GCAGCAATGC AATGGTGCGT TGATGCTTAT 
TCAGATAGCA TTCTTGGATT TGCTAATAAT ATTCGCACCA TAGATGGTGG AACTCATATT 
GAGGGTCTGA AAACAGTATT AACTAGAACG TTAAACTCAT TTGCAAAGAA AAGAGGTAAA 
CGAAAAGATG GAGATTCGAA TTTAGCAGGG GAAAATATTC GAGAAGGTTT AACAGCTGTT 
TTATCTGTAA AAGTTCCAGA TCCAGAATTT GAAGGTCAAA CAAAAACTAA ATTAGGTAAC 
ACTGAGGTTC GAGGAATTGT TGATAGCTTG GTAGGGACGG CTCTGAGTCA ATATTTAGAA 
TTCAACCCAG GTGTTATTGA CTTAATTTTA GAGAAAGCAA TACAAGCCTT TAATGCTGCT 
GAGGCAGCTA GAAGAGCTAG AGAATTGGTT CGTAGAAAAA GTGTTTTAGA AAGTTCTACT 
TTGCCAGGAA AATTGGCTGA TTGTAGTTCA AGAGACCCAT CAGAATCAGA AATTTATATA 
GTTGAGGGAG ATTCTGCTGG AGGATCGGCT AAGCAAGGAA GAGATCGAAA ATTTCAAGCA 
ATTTTACCTT TGAGAGGAAA AATTCTAAAT ATTGAGAAAA CCGATGATGC GAAGATGTAT 
AAAAATACTG AGATTCAATC TTTAATAACT GCTCTTGGTT TAGGAATAAA AGGTGAGGAT 
TTTGAAGTTA AGAATCTCAG ATATCACAGA GTAGTAATCA TGACTGATGC TGATGTAGAT 
GGTGCTCATA TAAGAACGTT GCTGTTGACT TTCTTTTATA GGTATCAAAA GGATCTTGTA 
GAAGGTGGAT ATATTTATAT TGCTTGTCCA CCTCTATATA AAGTTACAAG AGGAAAGAAT 
CATAAATATT GTTATAACGA ATCAGATATG CAAAAAACTC TTGCAAGTTT TGGAGAAAAA 
GCAAATTATA CAATTCAACG ATTTAAAGGT TTAGGAGAAA TGATGCCTAA ACAATTATGG 
GAAACAACTA TGGACCCAAC AACTAGAATG ATGAAAAGAG TTGAGATAGA AGATGCTCTT 
GAAGCTGATC GAATATTTAC AATTTTAATG GGTGATAAAG TTGCACCAAG AAGAGAATTT 
ATTGAAACTC ATAGTGTTGA TCTGGACCTG GCTACTTTAG ATATTTGA 

 

Protein sequence

MSKDSKVQAA YGAEQIQVLE GLEPVRKRPG MYIGSTGSKG LHHLVYEVVD NAVDEALAGH 
CDQITILLCE DGSASVSDNG RGIPTDLHPR TGKSALETVL TVLHAGGKFG SGGYKVSGGL 
HGVGISVVNA LSEWVEVTVR RQQQVHFQRF ERGASIGSLK SENLSKSDKN LTGTTVCFKP 
DDQIFTDGIS FEYGILSSRL RELAYLNGGV RIVFRDERKQ SNDSSQTPYE EVYFYEGGIK 
EYVEYMTKAK DSLHPEIIYV NSEKDGVQVE AAMQWCVDAY SDSILGFANN IRTIDGGTHI 
EGLKTVLTRT LNSFAKKRGK RKDGDSNLAG ENIREGLTAV LSVKVPDPEF EGQTKTKLGN 
TEVRGIVDSL VGTALSQYLE FNPGVIDLIL EKAIQAFNAA EAARRARELV RRKSVLESST 
LPGKLADCSS RDPSESEIYI VEGDSAGGSA KQGRDRKFQA ILPLRGKILN IEKTDDAKMY 
KNTEIQSLIT ALGLGIKGED FEVKNLRYHR VVIMTDADVD GAHIRTLLLT FFYRYQKDLV 
EGGYIYIACP PLYKVTRGKN HKYCYNESDM QKTLASFGEK ANYTIQRFKG LGEMMPKQLW 
ETTMDPTTRM MKRVEIEDAL EADRIFTILM GDKVAPRREF IETHSVDLDL ATLDI