Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_1195 |
Symbol | lysS |
ID | 3606588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | - |
Start bp | 1683417 |
End bp | 1684958 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637688070 |
Product | lysyl-tRNA synthetase |
Protein accession | YP_292388 |
Protein GI | 72383033 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCGTATG TACCCATTGC CTTGTCTGAA TTAAGAGATA CGCGCCTCGA GAAGGCAAAA GCACTAAAAA CCCTTGGGAA AGGTCCCTAT GGTTTGAATT TTCGACCTAC TGACTCTGCC GCTGTTTTGC AGGGAAAATA TAAAGACTTA CCAAATGGCG AAGAAAAAAA AGACGAAGTA TCTATCGCAG GGCGAGTAAC TTCTAGAAGA GTGATGGGAA AACTTGCTTT TTTTACTCTT TCCGATGAAA CAGGCATAAT TCAACTCTTT TTGGAAAAGG CGACCTTAAA TCGGAATGAA GATAGTGAGA ATCCAAAGAA TAATTTTGAG AACATTACCT CTTTGGTTGA CTCTGGTGAT TGGATAGGAG TCAGTGGAAT ATTAAGGAGA ACTGATAGAG GTGAACTTTC TATAAAGGTT TTCGAATGGT CAATGCTATC AAAATCTTTA CAACCCCTAC CAGATAAATG GCATGGACTT GCCGATGTAG AAAAGCGCTA TAGACAAAGA TATTTAGATT TAATTGTAAA TCCACAGTCA AGAAAAACTT TTCGAACTAG GGCTTTATTA GTTAGTTCAA TTCGACGTTG GTTAGATGAA AAAGACTTTC TTGAAATCGA GACTCCAGTT TTACAATCAG AAGCTGGAGG AGCGGATGCA AGGCCTTTCA TAACTCATCA CAACACGCTC GATTTACCTT TGTATCTGAG GATTGCAACA GAATTGCATC TTAAAAGACT TGTGGTGGGT GGATTTCAAA GGGTCTATGA ACTTGGAAGA ATTTTTAGAA ATGAAGGAAT TAGCACAAGG CATAATCCTG AATTTACTTC TGTTGAAATT TATGAGGCCT TTGCAGATTA TTTCGACATG ATGGATTTAA CAGAAAAATT ACTTTCTTCA GTTTGCGAAA AGATTTGTGG ATCGACCAAA ATTAATTATC AAGAGCAAGA AATAGATTTG CAACCTCCTT GGAGAAGGGC CACGATGCAT GATTTAGTTA AGGAATTTAC TGGAATTGAT TTTGAATTAT TTGGAGACAA TGTTGATGAT GCTAAGGCTG AAATGAGTCG AGAGGGGCTT CAAGTGCCTG ATAAGGCTGA TACTGTTGGA AGCCTATTAA ATGAAGCTTT TGAGCAAGCA GTAGAGCCTG AACTGATTCA GCCTACATTT GTCATGGATT ATCCAATTGA GATTTCTCCA TTGGCTAGAA AACATAGAAC TAAAAAAGGT TTAGTGGAAA GATTTGAACT TTTTATTGTT GGTAGAGAAA CTGCCAATGC TTTTAGCGAA TTAATTGACC CTATTGATCA AAGAGAACGT TTACTTTTAC AGCAAGCGAA AAAAGAAGCA GGTGATCTTG AGGCTCAAAG CCTGGATGAG GATTTTATCA ATGCTCTTGA GGTCGGAATG CCTCCCACAG GAGGTCTTGG AATAGGAATA GATAGGTTTG TAATGTTGTT AACAGATAGT CCTTCCATAA GAGATGTAAT AGCTTTTCCA CTTTTACGAC CAGAAGCAAA TTTAAAACAA ACTGCAAAGT GA
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Protein sequence | MPYVPIALSE LRDTRLEKAK ALKTLGKGPY GLNFRPTDSA AVLQGKYKDL PNGEEKKDEV SIAGRVTSRR VMGKLAFFTL SDETGIIQLF LEKATLNRNE DSENPKNNFE NITSLVDSGD WIGVSGILRR TDRGELSIKV FEWSMLSKSL QPLPDKWHGL ADVEKRYRQR YLDLIVNPQS RKTFRTRALL VSSIRRWLDE KDFLEIETPV LQSEAGGADA RPFITHHNTL DLPLYLRIAT ELHLKRLVVG GFQRVYELGR IFRNEGISTR HNPEFTSVEI YEAFADYFDM MDLTEKLLSS VCEKICGSTK INYQEQEIDL QPPWRRATMH DLVKEFTGID FELFGDNVDD AKAEMSREGL QVPDKADTVG SLLNEAFEQA VEPELIQPTF VMDYPIEISP LARKHRTKKG LVERFELFIV GRETANAFSE LIDPIDQRER LLLQQAKKEA GDLEAQSLDE DFINALEVGM PPTGGLGIGI DRFVMLLTDS PSIRDVIAFP LLRPEANLKQ TAK
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