Gene PMN2A_1190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1190 
Symbol 
ID3606583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1679478 
End bp1680662 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content39% 
IMG OID637688065 
Productpeptidase M20D, amidohydrolase 
Protein accessionYP_292383 
Protein GI72383028 
COG category[R] General function prediction only 
COG ID[COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase 
TIGRFAM ID[TIGR01891] amidohydrolase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGATT TAGGAAAAAA AATTGACGTT TTAACCAAGG ATATACTGCC TGATTTAATT 
CAATTACGTC GTCATCTCCA TGCTCATCCA GAGCTAAGCG GTCAGGAATA TCAAACTGCT
GCTCTTGTTG CAGGGGAGCT TAGAAAATCA GGGTGGGATG TAAAAGAAGC AGTTGGCAAA
ACGGGAGTAG TAGCTGAAAT GGGTAACAAA AGCGGACCTG TTGTTGGCTT ACGAGTTGAT
ATGGATGCTT TGCCAATTGA GGAGAGAACA GGTTTAGAAT ATTCATCTTC AATTCAAGGC
CTGATGCATG CCTGTGGCCA TGATCTACAT ACTTGTATTG GTTTGGGGGT GGCTAAAGTA
TTAGCAAAAA ACAAATTTAC AAATTCTCGA ATCCGAATCA TTTTTCAACC TGCTGAAGAG
ATTGCCCAAG GTGCAAATTG GATGAGAGCT GAAAAGGTTC TTGAAGGTGT TCAAGCTCTT
TTTGGTGTGC ATGTTTATCC AGATTTGTCA GTTGGCAAGA TTGGAATAAG AACTGGTACT
TTTACAGCTG CCGCGGCTGA ATTGGAAATA GAGATTATTG GTGATGGAGG GCATGGAGCC
AGACCACATG AAGGCATAGA TTCAATTTGG ATTTCTGCAA AAGTTATTAG TGGACTTCAA
GAGGCTATTA GTAGACGTTT AGATGCTCTT AAGCCCGTAG TTATTAGCTT TGGGAAGATT
TCAGGAGGTA GTGCTTTCAA TGTAATTGCT GAGAGGGTTA AGCTTCTAGG CACAGTAAGG
TGTCTTGATA ACAACCTTTA TGAAAAATTG CCTCAATGGA TTGAGAAAAT AGTACAAAAT
ATAGCCTCTA CTTACGGAGG TAAGGCGAAT ATAAAATTCA AGTCGATCGC GCCTCCAGTT
TATAACGATC CAGAGTTGAC TAGTTTGTTA TCTACCTGTG CGAAGAATTT TATGGATGAA
GAAAATATTG TTTATTTAGA AAATCCGTCA TTAGGAGCTG AAGATTTTGC TTTCTTCTTG
CAAGATGTTT CAGGCACGAT GTTTAGATTA GGAGTGGCTG GCAATAAAGG TTGTGCTCCA
TTGCACAGTG GAAACTTTTC TTTGGATGAA AGAAGCCTAG AATTAGGAAT AAAAATTTTG
TCTCAAACAT TAGTCATGGC ATCTAAAACC CTCCAAAACA TTTAG
 
Protein sequence
MKDLGKKIDV LTKDILPDLI QLRRHLHAHP ELSGQEYQTA ALVAGELRKS GWDVKEAVGK 
TGVVAEMGNK SGPVVGLRVD MDALPIEERT GLEYSSSIQG LMHACGHDLH TCIGLGVAKV
LAKNKFTNSR IRIIFQPAEE IAQGANWMRA EKVLEGVQAL FGVHVYPDLS VGKIGIRTGT
FTAAAAELEI EIIGDGGHGA RPHEGIDSIW ISAKVISGLQ EAISRRLDAL KPVVISFGKI
SGGSAFNVIA ERVKLLGTVR CLDNNLYEKL PQWIEKIVQN IASTYGGKAN IKFKSIAPPV
YNDPELTSLL STCAKNFMDE ENIVYLENPS LGAEDFAFFL QDVSGTMFRL GVAGNKGCAP
LHSGNFSLDE RSLELGIKIL SQTLVMASKT LQNI