Gene PMN2A_1176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1176 
Symbol 
ID3606567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1664515 
End bp1667034 
Gene Length2520 bp 
Protein Length839 aa 
Translation table11 
GC content39% 
IMG OID637688050 
Productphosphorylase 
Protein accessionYP_292369 
Protein GI72383014 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0058] Glucan phosphorylase 
TIGRFAM ID[TIGR02093] glycogen/starch/alpha-glucan phosphorylases 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGCT CCCAGTCACT AGACCTGCGT CTACCGACCC CAGGATGCTA TGCGGATCCT 
GTTCGGGCTG GCATGGATGC TGATGCTGTC TTCGATGGAA TGACTGAGCA TCTCTTTTTT
ACTCTCGGCA AACTGGCTAC ATCAGCAAGT CTCAGAGATC TCTATATGGC TTTGAGCTTT
GCTGTTAGAG ACAGATTGAT GAGTAGATAT TTAACTAGTC AAGAGACAAT CAGAGCAAGA
CCTCAAAAAA CAGTCGCATA TCTTTCAGCT GAATTTCTAA TTGGACCTCA ACTAAATAAT
AATTTACTCA ATCTTGGCAT CAAAAAAGAG GCAGAAGAAG CTCTTAAAAG GTTTGGAATT
GAATCTTTAA ATGAGATATT GGAAGTAGAA GAGGAGCCTG GCCTTGGGAA TGGAGGATTA
GGGAGACTTG CAGCTTGCTA TATGGAATCA CTTGCAAGTC TTCAGGTTCC TGCCGTGGGA
TATGGAATTA GGTACGAATT TGGGATTTTC AATCAATTAA TTAGAGATGG TTGGCAAGTC
GAAGTTACTG ACAAATGGCT CAAAGGTGGA TGGCCTTGGG AATTACCCCA ACCAGATGAA
GCTTGCTTAG TCGGTTTTGG AGGGCAAACT GAAAGTTATA CAGATGACAA TGGAAATTAT
CGCTCTCGAT GGATTCCAAG CGAACACGCT ATTGGTGTTC CACATGATGT GCCTGTTCTT
GGTTATCGAG TAAACAGCTG CGATCGATTG AGATTATGGA GAGCTGATGC AACCGAAAGT
TTTGATTTCT ACGCTTTCAA TATTGGCGAT TACTACGGAG CTGTAGAAGA GAAAGTAGCC
TCAGAAACAC TATCAAAAGT TCTATACCCC AATGATGGAA CTGACGAAGG AAGAAGACTA
CGCTTGAAGC AACAACACTT CTTCGTAAGT TGTTCCCTTC AGGATATGCT TAGAAGTTTA
GAAAAGCGGT CAATAGCTGT TGAGGAGTTT CCGAATCACT GGACAGTTCA ACTAAATGAC
ACTCATCCAG CTATTGCAGT AGCAGAGTTA ATGAGACTAT TAATTGATCA ACATAGATTG
GATTGGGATA AAGCCTGGGA AATTACCAAT AGATCCGTTG CATATACAAA CCACACTTTG
TTGCCCGAAG CTCTTGAGAA ATGGGACCTT AGCCTATTTA AAAATTTATT GCCTAGACAT
TTAGAACTTA TTTATGAAAT AAATAGACGA TTCTTACAAC AAGTAAGACT CAAGTATCCA
GGCAATGACT TGATTTTAAG GAAGCTTTCA ATTATTGATG AAGAAGGAGG GAAAGCTATA
CGAATGGCAC ATTTAGCAAC AATTGGAGCA CATCATGTCA ATGGAGTAGC AGCTCTTCAT
TCAGATTTAA TCAAGAGACA ATTACTACCT GAATTTGCAC AACTCTGGCC TGAGAAATTC
ACTAATGTCA CTAATGGAGT TACTCCACGT CGATGGGTAG CTTTAGCAAA TCCTGAACTT
TCTAAACTTC TTGACAAAGA GATTGGTCCT AATTGGATTA CCAATATGGA CCTACTACTA
GAGTTAGAAA AAAAAGAAAA TGACTCTAAC TTTTTAGATC TTTTTGCATC GGCTAAGCTA
TCTGGCAAAA GGAAACTAGC CGGCTATATT CATAGACAAA CTGGAGTTTT AGTAGATCCC
TCAAGTTTAT TTGATGTTCA AGTTAAAAGA ATTCACCAGT ATAAAAGACA GCATTTGAAT
GCTTTGCAAG TCATCGCACA ATATCTAAGA ATTAAAAATG GAATAACAAA AAATATTGCA
CCTCGTACTG TCATTTTTGG TGGTAAAGCT GCGCCAGGTT ATTTCATGGC GAAGTTAATG
ATTAGATTTA TCAATGGAAT TGCAGATGTA GTTAATGCAG ACCCAGATAT GGATGGATTA
CTAAGGGTAG TTTTTCTTCC CGATTACAAT GTAAAGCTAG GTGAGCAAGT CTATCCCGCA
ACTGATCTCT CTGAGCAGAT TTCAACTGCG GGGAAAGAAG CCTCAGGAAC TGGAAATATG
AAATTCGCTA TGAATGGTGC GTTAACAATT GGAACTCTTG ATGGAGCTAA TGTAGAAATC
AGGGATAGAG TTGGCGCAGA AAATTTCTTT TTGTTTGGTA AGACAGAATC AGAAATCATG
GAATTAAGAG ATCAAGGATA TAGTCCAAAT AGTTTTATTG CCGAATCAAA TGAACTACAA
GAAACTCTTA AGTTAATAGA AGTTGGGCAT TTTAGTAACG GGGATAGTGA ACTTTTTAGA
CCAATAATAA ATATCTTGAC AGGGAACGAT CCTTTCTTTG TTATGGCTGA TTTTGATGAT
TACCTTCGTG CACAAGATGA GGTTAGTAAA GCTTGGAAAA AAAGTAAAAA ATGGAATCGT
ATGGCATTGC TAAATACAGC AAGATCTGGG TTTTTCTCAT CAGACAGATC AATTAGAGAA
TACTGTCAAT CAATATGGAA AGTTAAACCA TTACCTGTAG AGATAAGTTG TGAAAAATAA
 
Protein sequence
MSSSQSLDLR LPTPGCYADP VRAGMDADAV FDGMTEHLFF TLGKLATSAS LRDLYMALSF 
AVRDRLMSRY LTSQETIRAR PQKTVAYLSA EFLIGPQLNN NLLNLGIKKE AEEALKRFGI
ESLNEILEVE EEPGLGNGGL GRLAACYMES LASLQVPAVG YGIRYEFGIF NQLIRDGWQV
EVTDKWLKGG WPWELPQPDE ACLVGFGGQT ESYTDDNGNY RSRWIPSEHA IGVPHDVPVL
GYRVNSCDRL RLWRADATES FDFYAFNIGD YYGAVEEKVA SETLSKVLYP NDGTDEGRRL
RLKQQHFFVS CSLQDMLRSL EKRSIAVEEF PNHWTVQLND THPAIAVAEL MRLLIDQHRL
DWDKAWEITN RSVAYTNHTL LPEALEKWDL SLFKNLLPRH LELIYEINRR FLQQVRLKYP
GNDLILRKLS IIDEEGGKAI RMAHLATIGA HHVNGVAALH SDLIKRQLLP EFAQLWPEKF
TNVTNGVTPR RWVALANPEL SKLLDKEIGP NWITNMDLLL ELEKKENDSN FLDLFASAKL
SGKRKLAGYI HRQTGVLVDP SSLFDVQVKR IHQYKRQHLN ALQVIAQYLR IKNGITKNIA
PRTVIFGGKA APGYFMAKLM IRFINGIADV VNADPDMDGL LRVVFLPDYN VKLGEQVYPA
TDLSEQISTA GKEASGTGNM KFAMNGALTI GTLDGANVEI RDRVGAENFF LFGKTESEIM
ELRDQGYSPN SFIAESNELQ ETLKLIEVGH FSNGDSELFR PIINILTGND PFFVMADFDD
YLRAQDEVSK AWKKSKKWNR MALLNTARSG FFSSDRSIRE YCQSIWKVKP LPVEISCEK