| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_1172 |
|---|
| Symbol | |
|---|
| ID | 3606563 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL2A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007335 |
|---|
| Strand | - |
|---|
| Start bp | 1659756 |
|---|
| End bp | 1660940 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637688046 |
|---|
| Product | (S)-2-hydroxy-acid oxidase |
|---|
| Protein accession | YP_292365 |
|---|
| Protein GI | 72383010 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGGAG CAGATGTTTC CTCTCCTGGG GTACTTAATA TTGATGACCT CAGGTCTAGA
GCTAAAAATC GTCTGCCGGC AATGGTTTTT AACTATATAG ATAGTGGTGC AGATAGAGAG
CAAACACTTT CGCAAAATTG CAACGCATAT AATGAAATTT TATTTAGACC TAGATGTGCA
GTTTCTGTTC CATCGTGTGA TCTTGGAATA TCTGTTTTAG ATCAGCAATT TCAACTTCCT
TTCTTGTTGG GACCAGTAGG TAGTAGCAGA ATGTTCTATC CTCAAGGAGA AGTTGTTGCA
GCTAGAGAGG CAGGAAAAGC TGGAACTGGA TATACCTTGT CGACTCTCTC AGGTTGTTTG
TTAGAAGACG TTAAAGCTGC TACAAACGGG CCAGCTTGGT ATCAGCTTTA TTTACTTGGT
GGTAAAGAAG TCGCTTTAAA AACAATTGCT AGAGCTAAAG AAGCTGGATT CTCAGCAATA
GTTGTAACTA TTGATACACC TGTATCTGGT TTGAGGGAAA GAGATATGCG ATCAGGAACT
CAACAGCTTT TATCAATGAA TCCTTTGGAG ATGCTTCCTT ATATTCCTCA AATATTAGTT
AAACCATGCT GGATGACTCA ATGGTTAAGT GATGGAGGCT TAATGAGTTT TCCTAATGTT
CAACTAGATG ATGGCCCTAT GGGATACACG GCAATTGGTC CTGCTTTAGA GCAATCAGTG
GTTACTTGGG ATGATCTTCA ATGGATAAGA GAAGCGTGGG GTGGAAAAAT TATTGTTAAG
GGTATACATA TTGGTGATGA CGCAAAAAAA GCGGCAGAGC TAGGGGCTGA TGCGATCGTT
ATTTCTAATC ATGGAGCCAG GCAACTTGAT AGCGTTGCTC CCACGATCCG TGTTTTGCCC
GAAATTTTAG CTGCAGTTGA TGGGAAAATA GATGTGTTGC TAGATGGAGG TATTCGCAGG
GGTAGTGATG TTGTGAAAGC ATTATGTCTT GGCGCGAAAG GAGTTTTGAT CGGTAGAGCA
TATGCGTATG GACTTGCTGC TGCAGGAGGG AAAGGCGTTG CCAGAGCTAT AGAAATTCTT
CAAACAGATA TAGTGAGAAC TATGAAACTA TTGGGATGTG GGTCTGTTGC CGATTTAAGT
AAATCTTATA TTCAAGTTCC TGAAAGTTGG GAGAGATTCG AATAA
|
|---|
| Protein sequence | MLGADVSSPG VLNIDDLRSR AKNRLPAMVF NYIDSGADRE QTLSQNCNAY NEILFRPRCA
VSVPSCDLGI SVLDQQFQLP FLLGPVGSSR MFYPQGEVVA AREAGKAGTG YTLSTLSGCL
LEDVKAATNG PAWYQLYLLG GKEVALKTIA RAKEAGFSAI VVTIDTPVSG LRERDMRSGT
QQLLSMNPLE MLPYIPQILV KPCWMTQWLS DGGLMSFPNV QLDDGPMGYT AIGPALEQSV
VTWDDLQWIR EAWGGKIIVK GIHIGDDAKK AAELGADAIV ISNHGARQLD SVAPTIRVLP
EILAAVDGKI DVLLDGGIRR GSDVVKALCL GAKGVLIGRA YAYGLAAAGG KGVARAIEIL
QTDIVRTMKL LGCGSVADLS KSYIQVPESW ERFE
|
|---|
| |