Gene PMN2A_1166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1166 
Symbol 
ID3606557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1653970 
End bp1654443 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content33% 
IMG OID637688040 
Productprotein tyrosine phosphatase 
Protein accessionYP_292359 
Protein GI72383004 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.654881 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAAAAA AAATTCTCTT TGTTTGCTTG GGCAATATTT GTCGTTCGCC TGCCGCTGAA 
GGCATTTTTA ATCACAAAAT TAAAGAGAGA GATTTAGAAA AATTGTTTGT AGTTGATTCC
GCAGGAACAG GTAGTTGGCA TGTTGGAAAT CTTCCTGATA AAAGAATGCG AGCAACAGCG
TTATCAAGGG GGATAGAACT GACCAGTAGG TCGAGACAAA TCGAAGAAAA TGATTTATAT
GAATTTGATC AGATTCTTGT TATGGATAAA GATAATCTCG ATGCTGTTAA ATCATTAACT
AAAGATCAAA ATAATCCTGT AAATTCTAAA ATAAAGCTTA TTCTAAGTTA CTCAAAAAAC
TTTCAATTAG ATGAAGTCCC TGACCCTTAT TATGGTGGAC AAAATGGATT CGATAAAGTT
ATAGATTTAC TTGATGATGC TATGGATGGA TTAATAGATA GTCTCACGAA TTAG
 
Protein sequence
MVKKILFVCL GNICRSPAAE GIFNHKIKER DLEKLFVVDS AGTGSWHVGN LPDKRMRATA 
LSRGIELTSR SRQIEENDLY EFDQILVMDK DNLDAVKSLT KDQNNPVNSK IKLILSYSKN
FQLDEVPDPY YGGQNGFDKV IDLLDDAMDG LIDSLTN