| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_1137 |
|---|
| Symbol | |
|---|
| ID | 3606526 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL2A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007335 |
|---|
| Strand | - |
|---|
| Start bp | 1623867 |
|---|
| End bp | 1625384 |
|---|
| Gene Length | 1518 bp |
|---|
| Protein Length | 505 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637688009 |
|---|
| Product | UDP-galactopyranose mutase |
|---|
| Protein accession | YP_292330 |
|---|
| Protein GI | 72382975 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
|---|
| TIGRFAM ID | [TIGR02733] C-3',4' desaturase CrtD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAAG AATCTATCAT TGTTGTTGGG GGAGGGATAG CTGGCTTAAC AGGTGCTGCT
CTTCTTTCTA AAGAGGGTTA TCAGGTAACT TTGGTCGAAG CACATAGTCA ATTAGGTGGT
TGTGCAGGAA CTTTTAAAAG AGGTTCTTAT ACCTTTGATG TTGGTGCTAC CCAAGTTGCA
GGTCTGGAGA GGGGAGGAAT TCATCATCGT TTATTTAATT ATTTAGATAT TCCTTTACCT
GATGCAAAAA TTTTGGATCC TGGCTGTTCA GTTACTCTCG GTGATGGGAG TAGGCCAATC
AATCTTTGGC ATGATCCATT GAGATGGCAG AAAGAAAGAC AAGAACAGTT TCCTGGGAGT
GAAATCTTCT GGTCATTATG TTCTAAAATT CATGAAAGTA ACTGGGAATT TGTCGAAAGA
GATCCAATAC TTCCGGTAAG AAATTTTTGG GATTTAAGTC AATTAATTAG AGCCATACGT
CCTTCAAATC TTTTAACTGG TTTCTTGAGT AAGTTGACTA TTGCAGACTT GCTTACAATA
ACCGGTTGTC ATAAAGATAG ACGTCTACGA AGTTTTTTAG ACCTTCAATT AAAACTTTAC
TCTCAAGAGC CAGCAAGTAG AACGGCAGCT TTATACGGTG CAACTGTTCT TCAAATGGCC
CAATCTCCTA GAGGTCTATG GCATCTTCAT GGATCAATGC AAATTCTTAG CGATTTATTG
AAAGATAGTT TTTTGAGAGA TGGTGGAAGC CTTTTGATTG GGCATAGAGT GACCAAAATA
ATAAGGAAAG AAAATTCAAA TGTTTTTGAT GTCAAAGTGC TTGATAGAAG AAAGAATTTG
TTACAGATGA AAGCATCAGA TATTGTTTTT AGCTTGCCTC CTCAATCTCT TTTAGATTTA
ATTCCTATTG ATGGAGGTTT ATCTACAACA TACCGTGAAA GTATAAAAAA ATTACCTAAA
CCTAGTGGTG CCGTTGTATT TTACGGAGCT CTCCGTCGTG TAGATTTGCC CGTTGATTGT
CCAGGTCATA TTCAAGTATT TGATGAGCAT TTTGGTTCTT TATTTATTTC TATCAGTTTG
GAAAATGATC AACGTGCACC AATTGGGATG GCCACTTTAA TAGCAAGTGT ATTTGTAGAT
ATTGATCAAT GGTCTAATCT AGATAGTCAA GCATATACCA GAAAAAAAAG TGTCGTATCG
AAACAGATTA GAGCTATTTT AGATCACAAG TTTGATTTGC TAGAGACGAG TTGGGATCAT
CAAGAACTTT CTACCCCAAG AAGCTTTGAA AGGTGGACAG GACGTCCTAG TGGAATAGTC
GGAGGGCTTG GTCAACATCC AGATCAATTT GGTCCTTTTG GCTTGTCAAG TAGAACCCCT
CTCAAAGGTT TATGGCTTTG TGGAGATTCT ATATACCCTG GTGAAGGTAC CGCTGGCGTC
AGTCAATCAG CTTTGATGGT TGTAAGACAA CTATTGGAAT CTAAAGGTAG ACATCTAAAT
ATCCCTGTCT TTAATTAG
|
|---|
| Protein sequence | MSEESIIVVG GGIAGLTGAA LLSKEGYQVT LVEAHSQLGG CAGTFKRGSY TFDVGATQVA
GLERGGIHHR LFNYLDIPLP DAKILDPGCS VTLGDGSRPI NLWHDPLRWQ KERQEQFPGS
EIFWSLCSKI HESNWEFVER DPILPVRNFW DLSQLIRAIR PSNLLTGFLS KLTIADLLTI
TGCHKDRRLR SFLDLQLKLY SQEPASRTAA LYGATVLQMA QSPRGLWHLH GSMQILSDLL
KDSFLRDGGS LLIGHRVTKI IRKENSNVFD VKVLDRRKNL LQMKASDIVF SLPPQSLLDL
IPIDGGLSTT YRESIKKLPK PSGAVVFYGA LRRVDLPVDC PGHIQVFDEH FGSLFISISL
ENDQRAPIGM ATLIASVFVD IDQWSNLDSQ AYTRKKSVVS KQIRAILDHK FDLLETSWDH
QELSTPRSFE RWTGRPSGIV GGLGQHPDQF GPFGLSSRTP LKGLWLCGDS IYPGEGTAGV
SQSALMVVRQ LLESKGRHLN IPVFN
|
|---|
| |