Gene PMN2A_1115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1115 
SymbolrplF 
ID3606503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1609814 
End bp1610353 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content37% 
IMG OID637687986 
Product50S ribosomal protein L6 
Protein accessionYP_292308 
Protein GI72382953 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0097] Ribosomal protein L6P/L9E 
TIGRFAM ID[TIGR03654] ribosomal protein L6, bacterial type 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCGTA CTGGAAAAAA ACCAATCTCC CTTCCCGAAA AGGTAGATGT AAAATTTGAA 
GGGCTTTCCA TCACTGTAAA AGGTCCGAAA GGAGAACTGA AGAGAACTCT TCCTAATGGG
GTAAGCCTAA GCAAAGATGA AAACTTTATT TTTGTTAAAC CTATAAATGA AAAAAGACAG
TCTAGGGAAA TGCATGGGCT ATGTAGATCT CTTGTTGCAA ATATGGTTGA GGGAGTTAGT
AATGGTTTTA CAAAAAAACT TGAGATTGTT GGTGTGGGAT CAAGAGCCCA AGTAAAAGGA
AAAACTCTTG TTGTTAGTGC AGGTTATAGT CATCCAGTTG AGGTTGTTCC TCCAGAAGGC
ATAACTTTTA AAGTTGAAAA TAATACAAAT GTGATTGTAA CTGGACCTGA TAAAGAATTA
GTTGGCAATG AAGCTGCCAA AATTAGAGCA ATCAGGCCCC CAGAACCTTA TAAAGGCAAA
GGAATTAAAT ATCAAGGAGA ACTAATAATT AGAAAAGCTG GTAAGTCTGG CAAAACTTAA
 
Protein sequence
MSRTGKKPIS LPEKVDVKFE GLSITVKGPK GELKRTLPNG VSLSKDENFI FVKPINEKRQ 
SREMHGLCRS LVANMVEGVS NGFTKKLEIV GVGSRAQVKG KTLVVSAGYS HPVEVVPPEG
ITFKVENNTN VIVTGPDKEL VGNEAAKIRA IRPPEPYKGK GIKYQGELII RKAGKSGKT