Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_1115 |
Symbol | rplF |
ID | 3606503 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | - |
Start bp | 1609814 |
End bp | 1610353 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637687986 |
Product | 50S ribosomal protein L6 |
Protein accession | YP_292308 |
Protein GI | 72382953 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0097] Ribosomal protein L6P/L9E |
TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCGTA CTGGAAAAAA ACCAATCTCC CTTCCCGAAA AGGTAGATGT AAAATTTGAA GGGCTTTCCA TCACTGTAAA AGGTCCGAAA GGAGAACTGA AGAGAACTCT TCCTAATGGG GTAAGCCTAA GCAAAGATGA AAACTTTATT TTTGTTAAAC CTATAAATGA AAAAAGACAG TCTAGGGAAA TGCATGGGCT ATGTAGATCT CTTGTTGCAA ATATGGTTGA GGGAGTTAGT AATGGTTTTA CAAAAAAACT TGAGATTGTT GGTGTGGGAT CAAGAGCCCA AGTAAAAGGA AAAACTCTTG TTGTTAGTGC AGGTTATAGT CATCCAGTTG AGGTTGTTCC TCCAGAAGGC ATAACTTTTA AAGTTGAAAA TAATACAAAT GTGATTGTAA CTGGACCTGA TAAAGAATTA GTTGGCAATG AAGCTGCCAA AATTAGAGCA ATCAGGCCCC CAGAACCTTA TAAAGGCAAA GGAATTAAAT ATCAAGGAGA ACTAATAATT AGAAAAGCTG GTAAGTCTGG CAAAACTTAA
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Protein sequence | MSRTGKKPIS LPEKVDVKFE GLSITVKGPK GELKRTLPNG VSLSKDENFI FVKPINEKRQ SREMHGLCRS LVANMVEGVS NGFTKKLEIV GVGSRAQVKG KTLVVSAGYS HPVEVVPPEG ITFKVENNTN VIVTGPDKEL VGNEAAKIRA IRPPEPYKGK GIKYQGELII RKAGKSGKT
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