Gene PMN2A_1113 details

Gene Information

• Locus tag: PMN2A_1113
• Symbol: rpsE
• ID: 3606501
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. NATL2A
• Kingdom: Bacteria
• Replicon accession: NC_007335
• Strand: -
• Start bp: 1608771
• End bp: 1609397
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 637687984
• Product: 30S ribosomal protein S5
• Protein accession: YP_292306
• Protein GI: 72382951
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01021] ribosomal protein S5, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.7604
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGACT CTAACAACCA GTCCCCAAAT AAAAAAACTT CTGGATCATC AAGTGCCCCT 
CCAGCGGCAG ATGGTAGGCA GGAAAATCGT CGCAGTCGTG GTGAAAAACG CGGAGGAAGA 
AGAGATCGAA GAGGTCAAGA AAGAGATTCT GAATGGCAAG AAAGAGTTGT CCAAATTAGA 
AGGGTTTCGA AAACAGTCAA AGGTGGAAAA AAAATGAGTT TTAGAGCAAT AGTTGTAGTA 
GGCAATGAAA AAGGACAAGT TGGAGTTGGT GTTGGAAAAG CGGGAGATGT TATAGGTGCC 
GTTCGTAAAG GAGTTGCTGA TGGCAAAAAA CATTTAGTTC GTGTTCCTTT AACTCGAAAT 
AGTTCGATCC CAACTCTCTC TAACGGTAGA GATGGGGCAG CAAGTGTGTT GATTCGTCCT 
GCAGCTCCTG GAACAGGTGT AATTGCGGGT GGTTCAATTC GTACCGTTCT AGAGTTAGCT 
GGAATTAAGA ATGTACTTGC AAAGCGATTA GGCAGTAAGA CCCCTCTTAA TAATGCTCGT 
GCTGCAATGG TTGCTTTAAG TGAGTTAAGA ACTCATAAAG CCACAGCAAA AGAGCGTGGT 
ATTTCACTTG AGCAGATTTA TTCCTAA 

 

Protein sequence

MTDSNNQSPN KKTSGSSSAP PAADGRQENR RSRGEKRGGR RDRRGQERDS EWQERVVQIR 
RVSKTVKGGK KMSFRAIVVV GNEKGQVGVG VGKAGDVIGA VRKGVADGKK HLVRVPLTRN 
SSIPTLSNGR DGAASVLIRP AAPGTGVIAG GSIRTVLELA GIKNVLAKRL GSKTPLNNAR 
AAMVALSELR THKATAKERG ISLEQIYS