Gene PMN2A_1112 details

Gene Information

• Locus tag: PMN2A_1112
• Symbol: rplO
• ID: 3606500
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. NATL2A
• Kingdom: Bacteria
• Replicon accession: NC_007335
• Strand: -
• Start bp: 1608313
• End bp: 1608765
• Gene Length: 453 bp
• Protein Length: 150 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637687983
• Product: 50S ribosomal protein L15
• Protein accession: YP_292305
• Protein GI: 72382950
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0200] Ribosomal protein L15
• TIGRFAM ID: [TIGR01071] ribosomal protein L15, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTATTA AATTAGAATC TCTTCAATCA AATAAAGGAT CTAGACGTAA AAAAATGCGT 
AAAGGTCGAG GAATAGCTGC TGGTCAAGGT GCTAGTTGCG GCTTTGGTAT GAGGGGACAA 
AAATCTAGAT CAGGAAGACC TACTCGCCCA GGATTTGAGG GTGGTCAAAT GCCTTTGTAC 
AGACGAGTTC CAAAACTAAA GCATTTCCCA ATTGTTAATC AGAAAAATTT TACTGTCCTC 
AATGTTTCTA GGTTGAATGC ATTGAAAGAT GGGACAATAG TTAACCTCGA TTTATTGGTC 
AAGGAGGGTA TTTTGACTAA ACCAAAAAAT CCTCTAAAAA TCCTTGGTAA TGGGAAATTA 
GAAGTAAAAT TGACTGTTCA AGCTGCAGCG TTTACAGCAT CTGCTAAAAA TAAAATTGAA 
GAAGTCGGGG GCTCATGTGA GCTATATAAC TAA 

 

Protein sequence

MTIKLESLQS NKGSRRKKMR KGRGIAAGQG ASCGFGMRGQ KSRSGRPTRP GFEGGQMPLY 
RRVPKLKHFP IVNQKNFTVL NVSRLNALKD GTIVNLDLLV KEGILTKPKN PLKILGNGKL 
EVKLTVQAAA FTASAKNKIE EVGGSCELYN