Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_1106 |
Symbol | |
ID | 3606494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | - |
Start bp | 1604278 |
End bp | 1605216 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637687977 |
Product | DNA-directed RNA polymerase subunit alpha |
Protein accession | YP_292299 |
Protein GI | 72382944 |
COG category | [K] Transcription |
COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTGCAAT ACCAGATAGA CAGGATCGAT CATCAAGTTT CTAATGATCG TTCCCAAACA GGTGTCTTCC TAATCGGACC TCTTGAGAGA GGTCAAGCAA CAACTTTGGG TAATTCTTTA CGCAGAGTGT TGATGGGCGG ACTCGAAGGC AGCGCAGTTA CAGCTGTCAG GATTGCAGGA GTTAATCATG AATATGCAAC AATTCCTGGT GTAAGAGAAG ACGTGCTAGA CATCCTTCTA AATTGTAAAC AAATTTCAGT TGACAGTCGT AGTCAAGAGC TTGAGATAGG AAGACTTGTT GTAACAGGCC CAGCTGATGT TAAAGCAAAG GATATTCAGT TCTCATCTCA AGTTGAAGTT GTTGATGGTG ATCGTCCAAT AGCAACAGTT CAGGAGGGGC ATAACCTAGA ACTAGAAATA CATGTAGAAA GAGGTGTTGG ATATCGACCA GTTGATAGAA AAAATGAGGA GACAAGCGCA ATTGATTTGC TTCAGATAGA TGCTGTATTT ATGCCTATAA ATAGAGTTAA TTTTACTATT GATGAAACTG CTGTAGCTGA GGGAGGATCA ACCAGAGAAA GATTAAAAAT GGAGTTGGTC ACCGATGGAT CCACCTCCCC AGACGATGCA TTAGCGGAAG CTGCTAATCA ATTAATCGAA CTTTTTCAAC CTCTTGCTAC TGTTTCAATG GTAGAAGAGA TTCCTGAAGA GCCAGAGCCT GCAGCAGAGG CCCAAATCCC CCTCGAGGAG TTAAACTTAT CTGTAAGAGC TTATAATTGC CTAAAACGAG CCCAAGTGAA CTCTGTTTCA GACTTGATGG GTTTCAGTTA TGAGGATTTA TTGGAAATTA AGAACTTCGG TTCTAAATCC GCTGACGAAG TTATTGAAGC TCTTGAGAGA ATTGGAATTT CTATTCCACA AAGTAGAACT TCTGCATGA
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Protein sequence | MLQYQIDRID HQVSNDRSQT GVFLIGPLER GQATTLGNSL RRVLMGGLEG SAVTAVRIAG VNHEYATIPG VREDVLDILL NCKQISVDSR SQELEIGRLV VTGPADVKAK DIQFSSQVEV VDGDRPIATV QEGHNLELEI HVERGVGYRP VDRKNEETSA IDLLQIDAVF MPINRVNFTI DETAVAEGGS TRERLKMELV TDGSTSPDDA LAEAANQLIE LFQPLATVSM VEEIPEEPEP AAEAQIPLEE LNLSVRAYNC LKRAQVNSVS DLMGFSYEDL LEIKNFGSKS ADEVIEALER IGISIPQSRT SA
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