| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_1103 |
|---|
| Symbol | rplM |
|---|
| ID | 3606491 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL2A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007335 |
|---|
| Strand | - |
|---|
| Start bp | 1602352 |
|---|
| End bp | 1602804 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637687974 |
|---|
| Product | 50S ribosomal protein L13 |
|---|
| Protein accession | YP_292296 |
|---|
| Protein GI | 72382941 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0102] Ribosomal protein L13 |
|---|
| TIGRFAM ID | [TIGR01066] ribosomal protein L13, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.698543 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGA CATCAGTTCC ATCGCCGGAC TCAATAGATC GCCAGTGGTT TCTCGTGGAT
GCAGAGAATC AGACTCTTGG TCGACTAGCA ACTGAAGTTG CTAGCGTCCT AAGGGGTAAG
ACAAAGCCAA ATTTCACTCC TCACTTGGAT ACTGGAGATT TTGTTATTGT CGTAAATGCA
GAAAAGATCA AAGTAACCGG CAAAAAATCA GATCAAAAGC TTTACCGCAG ACATTCTGGA
CGTCCAGGCG GCATGAAAGT TGAAACCTTT AAGGCTCTTC AATCCAGAAT CCCTGAGAGA
ATAGTTGAAA AGGCAATTAA AGGAATGCTG CCTCACACAA GGTTAGGAAG GCAATTATTT
ACGAAACTCA AAGTTTATAA AGGCTCTGAT CATCCTCATT CAGCCCAAGA GCCTAAAATT
CTTTCTCTAA ATTCTGAATC TGTTACAAAA TGA
|
|---|
| Protein sequence | MNKTSVPSPD SIDRQWFLVD AENQTLGRLA TEVASVLRGK TKPNFTPHLD TGDFVIVVNA
EKIKVTGKKS DQKLYRRHSG RPGGMKVETF KALQSRIPER IVEKAIKGML PHTRLGRQLF
TKLKVYKGSD HPHSAQEPKI LSLNSESVTK
|
|---|
| |