Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_1098 |
Symbol | alr |
ID | 3606486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | - |
Start bp | 1598726 |
End bp | 1599934 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637687969 |
Product | alanine racemase |
Protein accession | YP_292291 |
Protein GI | 72382936 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0787] Alanine racemase |
TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGAGTA TGTCAAAAAT CAATAGAACT GAAAGATCTT TCACTTTTGG TGGGTTAACT GAAAATGTAA TTACCCCTGA TCCTCGCAGT CGTGCATGGG TTGAGGTTGA TTCGAAAATT ATCGAAAATA ATGCAAGAGT CTTGAAAAAC TTTATTGGCG ATGATTGTTC ATTGATGGCA GTTGTGAAAG CTGATGGATA CGGACATGGT GCAGAGACTG TTGCTAAATC TGCGTTAACT GGAGGTGCAG ACAGTCTTGG AGTAGCAACT TTAGAAGAGG GTATTCAATT AAGGAATGCT GGCTTGAAGT GTCAGATATT AATTCTTGGA AATCTAATTA ATTCAGAAGA ACTTTATTCT TCCTTTTGCT GGGATCTTAT TCCTACGATT AGTGGAATTC GTGAGGCAAT AATTTGCAAT AATATCGCAG AAAATAAGAA TAAAAAATTT GCTATTCACT TAAAAATAGA CACAGGTATG ACGAGACTTG GCTGTAACTG CAATCAATTT AAAGAATTAA TTAATAAGAT TGATTGTCTT GAAAATATAG CCTTAGAAGG TATATATAGT CATTTGGCAA TTGCTGATAG ATATCTAGAA AATAATACTC AACTAAGTTT CACGCAGATT CAGTTAAATA GATTTGAGAA GGTCTTAAAG GGTTTGGGCA AAAGAAACAA GTTTATATGC AGACACCTAG CAAATTCTGC GGGAACACTT TCAGATAGTC GACTTCATTT TGATATGGTT CGGGTGGGAC TAAGTTTGTA TGGTTATTTC CCTGTAAATG ATTTTAAGTC TGATTTGAAA CTTAGCCCAG CGTTGAAAGT TAAGGCTCGA GTTACTTTGG TTAGGGATGT TGGGAAAGGA ATTGGAGTGG GGTACGGACA TTTTTTTAAA ACTCAAAGGG CAAGCAAGCT TGCTGTCGTT GCTATTGGCT ATGCAGATGG GGTAAGCAGA AGCCTTTCTG GAAAAATATC AGCCTCAATA GATGGAGTGT TAGTTCCTCA AGTAGGTGCA ATTGCAATGG ATCAAATGGT TTTTGACATA ACTGATAAAC CAGATATAAA AACAGGTCAG GTTTTAACTC TTCTTGGAAC TGATGGTGAG GTTTGCATCT CTCCTCAAGA TTGGTGTGAT TTGTCTGGAT CAATTCCATG GGAAGTTCTT TGCAGTTTCC GAAATCGACT TCCTAGAGTT GTCACTTAA
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Protein sequence | MQSMSKINRT ERSFTFGGLT ENVITPDPRS RAWVEVDSKI IENNARVLKN FIGDDCSLMA VVKADGYGHG AETVAKSALT GGADSLGVAT LEEGIQLRNA GLKCQILILG NLINSEELYS SFCWDLIPTI SGIREAIICN NIAENKNKKF AIHLKIDTGM TRLGCNCNQF KELINKIDCL ENIALEGIYS HLAIADRYLE NNTQLSFTQI QLNRFEKVLK GLGKRNKFIC RHLANSAGTL SDSRLHFDMV RVGLSLYGYF PVNDFKSDLK LSPALKVKAR VTLVRDVGKG IGVGYGHFFK TQRASKLAVV AIGYADGVSR SLSGKISASI DGVLVPQVGA IAMDQMVFDI TDKPDIKTGQ VLTLLGTDGE VCISPQDWCD LSGSIPWEVL CSFRNRLPRV VT
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