Gene PMN2A_1098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1098 
Symbolalr 
ID3606486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1598726 
End bp1599934 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content37% 
IMG OID637687969 
Productalanine racemase 
Protein accessionYP_292291 
Protein GI72382936 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0787] Alanine racemase 
TIGRFAM ID[TIGR00492] alanine racemase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAGTA TGTCAAAAAT CAATAGAACT GAAAGATCTT TCACTTTTGG TGGGTTAACT 
GAAAATGTAA TTACCCCTGA TCCTCGCAGT CGTGCATGGG TTGAGGTTGA TTCGAAAATT
ATCGAAAATA ATGCAAGAGT CTTGAAAAAC TTTATTGGCG ATGATTGTTC ATTGATGGCA
GTTGTGAAAG CTGATGGATA CGGACATGGT GCAGAGACTG TTGCTAAATC TGCGTTAACT
GGAGGTGCAG ACAGTCTTGG AGTAGCAACT TTAGAAGAGG GTATTCAATT AAGGAATGCT
GGCTTGAAGT GTCAGATATT AATTCTTGGA AATCTAATTA ATTCAGAAGA ACTTTATTCT
TCCTTTTGCT GGGATCTTAT TCCTACGATT AGTGGAATTC GTGAGGCAAT AATTTGCAAT
AATATCGCAG AAAATAAGAA TAAAAAATTT GCTATTCACT TAAAAATAGA CACAGGTATG
ACGAGACTTG GCTGTAACTG CAATCAATTT AAAGAATTAA TTAATAAGAT TGATTGTCTT
GAAAATATAG CCTTAGAAGG TATATATAGT CATTTGGCAA TTGCTGATAG ATATCTAGAA
AATAATACTC AACTAAGTTT CACGCAGATT CAGTTAAATA GATTTGAGAA GGTCTTAAAG
GGTTTGGGCA AAAGAAACAA GTTTATATGC AGACACCTAG CAAATTCTGC GGGAACACTT
TCAGATAGTC GACTTCATTT TGATATGGTT CGGGTGGGAC TAAGTTTGTA TGGTTATTTC
CCTGTAAATG ATTTTAAGTC TGATTTGAAA CTTAGCCCAG CGTTGAAAGT TAAGGCTCGA
GTTACTTTGG TTAGGGATGT TGGGAAAGGA ATTGGAGTGG GGTACGGACA TTTTTTTAAA
ACTCAAAGGG CAAGCAAGCT TGCTGTCGTT GCTATTGGCT ATGCAGATGG GGTAAGCAGA
AGCCTTTCTG GAAAAATATC AGCCTCAATA GATGGAGTGT TAGTTCCTCA AGTAGGTGCA
ATTGCAATGG ATCAAATGGT TTTTGACATA ACTGATAAAC CAGATATAAA AACAGGTCAG
GTTTTAACTC TTCTTGGAAC TGATGGTGAG GTTTGCATCT CTCCTCAAGA TTGGTGTGAT
TTGTCTGGAT CAATTCCATG GGAAGTTCTT TGCAGTTTCC GAAATCGACT TCCTAGAGTT
GTCACTTAA
 
Protein sequence
MQSMSKINRT ERSFTFGGLT ENVITPDPRS RAWVEVDSKI IENNARVLKN FIGDDCSLMA 
VVKADGYGHG AETVAKSALT GGADSLGVAT LEEGIQLRNA GLKCQILILG NLINSEELYS
SFCWDLIPTI SGIREAIICN NIAENKNKKF AIHLKIDTGM TRLGCNCNQF KELINKIDCL
ENIALEGIYS HLAIADRYLE NNTQLSFTQI QLNRFEKVLK GLGKRNKFIC RHLANSAGTL
SDSRLHFDMV RVGLSLYGYF PVNDFKSDLK LSPALKVKAR VTLVRDVGKG IGVGYGHFFK
TQRASKLAVV AIGYADGVSR SLSGKISASI DGVLVPQVGA IAMDQMVFDI TDKPDIKTGQ
VLTLLGTDGE VCISPQDWCD LSGSIPWEVL CSFRNRLPRV VT