Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_1092 |
Symbol | |
ID | 3606479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | + |
Start bp | 1588059 |
End bp | 1589897 |
Gene Length | 1839 bp |
Protein Length | 612 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637687962 |
Product | TPR repeat-containing protein |
Protein accession | YP_292285 |
Protein GI | 72382930 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAATTGTA GAATTACTGA ACTTGTAAGT TCGAAAAAAG TTTTGACATC TCGTGATAAA GATCAAGGAA AAAAGAAAAT CAAGAATGTT AAAACATACC CAGTTCCATT CACTTTGGAA GAAAAAAAGA AAAATATTAC TTTTAATACA AACACGCCTT CTCAACCTTC TAAAGAACAA ATAATCAATC AAGCAATTGA ATTTCATTCA CAAGGAAATA TTCCAGAAGC GGCAAAATAT TATAAAAATT TCATCAATCA AGGATTCAAA GATGAGAGGG CTTTTTCTAA TTATGGAGTC ATATTAAAAA GTCTTGGTAA ATTAAAAGAA GCAGAAATAT CAACTCGTAA AGCAATTGAA ATTAAACCTG ATTTAGCAGA TTCATATTAT AATCTGGGGA TCATTTTAAA AGATCTTGGC AAATTAAAAG AATCAGAAAC ATACACTCGC AAGGCTATTG AACTGAATCC TAATTACGCA GAGGCTCATT CCATTTTAGG ACTAATATTG CGAGATCTTG GTAACTTACA AGAAGCAGAA AGCTACACTC GCAAAGCTAT TGAAATTAAA CCTAATTACG CAGAAGCTTG TTCCAATTTA GGACTAATAT TGAAAGATAG CGGCCAATTA CAAGAAGCAG AATTGTCATG TCGCAAAGCG ATTGAAATTA ATCCTAATTT CGCTGATGCG TATTCCAACC TGGGAGGTAT ATTGAGCGAT CTTGGCAAAT TAAAAGAAGC AGAGCTATCA GCTCGCAAAG CCATTGCAAT TAAACCTAAT TACGCAGAAG CTTGTTCAAA TTTAGGAATA ATATTGAAAG ATCTTGGTAA CTTGCAAGAA GCAGAAAGCT ACACTCGCAA AGCTATTGAA ATTAAGCCAA ATTTCGCAGA GGCTCTTTAT AGCCTGGGAA GCTTATTGAT AGATCTTGAT AAACGAGAAG AAGCAATGAA AAGCTTGTTA AAGGCAGTTG AATTAAAACC TGCATTAGAT AAGGCAGTTA GAGACTTAGC CATTAATTTA AATTATGAAA AAAAATTTGA ATTAGCTTTA AAATATCTAA GCAAAAATGA ATCTATTTCT TGTCAAAGCC TATATCTAGG CTGTCTATTA TCTCTAGATC GAGAAAAAGA GTTTAATGAA AAATATCAAG AACTATCTAA AAAGAGAGTC TGTAATGCTG AGATTGGAGG CATAATTGAG CATGCCAGTA TTATTTACGA AAAAAAATAT CATTCACCTT TCTGTAATCA AGCCATGAAA TATGTCTTGT TTGAAAAAAT AAATGAAGAA TCATTCTCCA CAAATGATCT AAACAAAATG ATTTCTTATA TAAAAAACGA AAAAACTATG ATGAGGTATC AAGGTACTCT TCATAAAGGA ATTCAAACTT CTGGAAATTT ATTTTCATTA GATCTTCCAT TTGTTAGGTC AATTAAAAAA GCCTTAGAAG AAAAGATTGA ACTTTACAGA AATAAATTTA AAGATAGTGG GCAAGGCTTC ATCCTTAATT GGCCCGAAAA GTATGAACTT CGGTCATGGA TGATAAGTAT GAAAAACGGA GGATTCCTGG CACCTCATAA TCATGAATAT GGATGGGTTA CTGGTAGTTT TTATCTACAG ATTCCTAAAT ATAGTAATAA TGATAATCAT TCAGGTGATA TAGCTTTTAG TTATAAAGGT CCTAGATATC CTAATAAAGG TAAGAATTTT AATTTAATGA TTAAGAAAAT AGAAATCAGA GATATTTGTA TATTTCCTTC TTCTTTATTT CACCATACAA TTCCATTTGA AAGCACAGAA GAACGGATAT GTTTTGTTTT TGATTTAATA CAGAAATAA
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Protein sequence | MNCRITELVS SKKVLTSRDK DQGKKKIKNV KTYPVPFTLE EKKKNITFNT NTPSQPSKEQ IINQAIEFHS QGNIPEAAKY YKNFINQGFK DERAFSNYGV ILKSLGKLKE AEISTRKAIE IKPDLADSYY NLGIILKDLG KLKESETYTR KAIELNPNYA EAHSILGLIL RDLGNLQEAE SYTRKAIEIK PNYAEACSNL GLILKDSGQL QEAELSCRKA IEINPNFADA YSNLGGILSD LGKLKEAELS ARKAIAIKPN YAEACSNLGI ILKDLGNLQE AESYTRKAIE IKPNFAEALY SLGSLLIDLD KREEAMKSLL KAVELKPALD KAVRDLAINL NYEKKFELAL KYLSKNESIS CQSLYLGCLL SLDREKEFNE KYQELSKKRV CNAEIGGIIE HASIIYEKKY HSPFCNQAMK YVLFEKINEE SFSTNDLNKM ISYIKNEKTM MRYQGTLHKG IQTSGNLFSL DLPFVRSIKK ALEEKIELYR NKFKDSGQGF ILNWPEKYEL RSWMISMKNG GFLAPHNHEY GWVTGSFYLQ IPKYSNNDNH SGDIAFSYKG PRYPNKGKNF NLMIKKIEIR DICIFPSSLF HHTIPFESTE ERICFVFDLI QK
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