| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_1078 |
|---|
| Symbol | |
|---|
| ID | 3606465 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL2A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007335 |
|---|
| Strand | + |
|---|
| Start bp | 1568831 |
|---|
| End bp | 1573420 |
|---|
| Gene Length | 4590 bp |
|---|
| Protein Length | 1529 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637687948 |
|---|
| Product | ferredoxin-dependent glutamate synthase |
|---|
| Protein accession | YP_292271 |
|---|
| Protein GI | 72382916 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0069] Glutamate synthase domain 2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATCAAC GAATCTCCAG ATCAAATTGG CCTTACTGCG ATAGCACCTA TCCAGATGCC
TTCTCTGGGG AAAAAGACTC TTGTGGAGTT GGATTTATAG CTAGCGTTGA AGGCAAACAA
AATCATTGGG TTTTAACTCA GGCATTACGT GGGCTGAGTT GCATGGAACA TAGAGGAGGA
TGTGGGGGAG ATAGCGACTC AGGAGATGGT GCTGGGATTT TATGTGAAAT CCCATGGTCA
TATTTCAAGC AAGTTTGGGA CAAGGCTAAG CATTGCGAAC CCCAAGCATC AGGAATAGGC
ATGATATTTA TGCCTAAAGA CTTAAAAAAT AGAGAACTAG CGAAAAAAAT ATGTGAGCAG
GAAGCTGAGT CCTTAGGATT AACCTCCAAA GGATGGAGAG ATGTTCCTGT TCATGAAGAA
GTTTTAGGCA AACTTGCAAG GGAAAATGAA CCTTTTATTA CACAATGGAT AGTTGATATT
AAGGATAAAG AAATCAATCT TGAGGCTTTA CTTTTCAGAT TGAGGCAAAG GATTTCTAAT
CGAGCAAATA TAGAATTAAA GGAAGATGAA TTAGGTCTCT ATATTTGCTC TTTAAGTAGC
AAAACTATTG TTTATAAAGG AATGGTTAGA TCTGAAATAT TGGCTCCTTT CTATAATGAT
TTAAAAGACG ATAGATTTGA AGTCTCATAT GCTGTTTACC ATAGAAGATT TAGTACAAAT
ACATTACCTA AATGGCCTTT AGCTCAACCA ATGAGACTTT TAGGTCATAA TGGAGAAATA
AATACATTAC TCGGAAATAT AAATTGGGCT AAAGCAACAG AAACAGATAT AAGTTCTGTT
TGGAAAGAAA ATGCAAATGA TCTAAAACCT ATAGTCGATA ATTTATATAG TGATTCAGCA
AATCTTGATT TAAACCTTGA ACTATTAGTT CGAAGTGGAA GGCCAATAAC TGATAGTTTG
TTAACACTTA TTCCCGAAGC TTTTAGAGAC CAGCCTGAAT TAATCAATAA ACCTGAAATA
ACTGCTTTTT ATGAATATGC TGCAGGAACC CAAGAACCTT GGGATGGTCC AGCTTTAATA
GTCTTTACTG ACGGAACAAA TATTGGAGCA ACTCTTGATA GAAATGGTTT AAGACCAGCT
CGCTATTGCA TTACTAAAAA TGGATATGTT GTTATGGGAT CTGAAACAGG TGTTGTTGAA
TTAGAAGAAG ATGTAATCCA AGAAAAAGGT CGTCTAGGTC CTGGTCAAAT GCTTGCGGTA
GATTTAGAAA GCAAGAGAAT TTTACGAAAC TGGGATGTTA AAGAAGAGTC AGCAAATAGA
TACCCATATT TAGATTGGTT AAAAGCAAAT CGTATAAACC TTAACAACCA AAGTTGGGAA
ATAAATAATA AATTTGATAA GCAAAAATTG CTTCAATATC AAATTGCATT TGGCTTTAGT
GCAGAAGATT TTGATTACAT AATTAATAGC ATGGCAGCAA ATGCAAAAGA ACCAACTTAT
TGCATGGGAG ATGATATACC ACTAGCAATA CTTTCTAACA AATCACATAT TCTTTACGAC
TATTTCAAAC AGAGATTTGC ACAAGTTACC AACCCACCAA TTGATCCTCT TAGAGAAAAG
CTAGTCACTA GCTTAGAGAT GAATCTAGGG GTCAGGAAAG CGCCCTTGAG ACCCAAAGAA
GAGTCTGCAA GGCTAATTCA TCTTGAATCT CCAATACTTA ATGAAAAAGA ATTAAATTCA
ATAAAAAATT CTGAACTTTC GTGTAAGCAA ATATCGACTT TAATTCCTAT TAACGATGAT
AAAATTATTC TCGAAGAAGG TCTCAAAAAT CTATGTAAAG AAGCAGAAGA TAGTGTAATC
AATGGTAGAG AGATACTAAT ACTTTCGGAT AGAGATATTA ATCGAGAAAA CTCTTACATT
CCACCTCTTC TTGCGGTTGG TGCAGTTCAT CATCATTTAC TTAGAAAAGG GCTAAGACTA
AAAACCTCGA TAATTATAGA TACAGCTCAA TGCTGGAGTA CTCATCACAT TGCCTGTCTG
ATTGGATTTG GAGCAAGTGC AATTTGTCCT TGGCTGACAT GGGAAACTAC TCGCCATTGG
TGGCAACTAC CTAAAACTCA AAAACTTATT TCCGATGGGA AGTTATCTAA TTTATCTATA
GAGATTGCTC AAGATAATGT TAAGAAAGCA ATGGAAGATG GATTAAGAAA AATACTTTCG
AAGATAGGAA TCTCAGTATT AGCAAGTTAT CACGGAGCAC AAATCTTTGA AGCTATAGGT
ATCGGTGCAG ATTTAATTGA TTTAGCTTTC AAGGGAACAA CAAGTCGTAT AGCAGGTCTA
ACTCTGAGCG AATTATCAAT CGAAACAATT TCATTTCATA AAAAAGCTTT CCCCGAACTG
GAGCAAAAAA AACTTGATTT TAATGGATTT GTTCAATATC GAAATAGCGG AGAATTTCAT
TTAAATAATC CAGAAATGTC AAAAATTCTT CATGCTGCAG TGAAAGCTGG GCCTGAATAT
GACCACTTCA AAACTTATCA ACAACTTCTA GAAAATCGTC CCGCTACTAC CCTCAGAGAT
CTCCTTACAT TCAAAACAGC TACCCAGCCT TTACCCCTTG ATCAAATAGA GAGTGTTGAG
AATATTTGTC AAAGATTTTG CACCGGTGGA ATGAGCCTAG GTGCCCTATC TAGGGAAGCG
CATGAAGTTC TTGCAATAGC AATGAATAGG ATTGGAGGCA AAAGTAATAG TGGTGAAGGA
GGTGAGGATC CTGCAAGATT CAATGTCCTC GAGGATGTTG ATGAAAATAA TCAATCAAAA
ACATTACCTA ATCTCAAAGG ACTTTTAAAT GGAGATACAG CATGTTCTGC AATTAAACAA
ATTGCCTCTG GCCGATTTGG TGTAACCCCT GAATATTTAA CTAGCGGCAA GCAATTAGAA
ATCAAAGTAG CTCAAGGTGC AAAGCCTGGA GAAGGAGGAC AATTACCTGG GCCAAAGGTT
GATGAATACA TAGCAAGGCT TCGTAATAGC AAGCCAGGAG TAGCTCTTAT TTCTCCTCCT
CCTCATCATG ATATCTATTC CATAGAGGAT CTTGCCCAAC TTATTCATGA CCTACATCAA
ATAAATCCAA CTGCAAAAGT TAGTGTGAAA TTAGTTGCTG AGATAGGGAT TGGCACAATT
GCAGGAGGAG TAGCTAAAGC CAATGCTGAT GTCATCCAAA TTTCAGGACA TGATGGCGGT
ACGGGCGCAT CTCCACTTAG TTCAATCAAA CATGCTGGTT TGCCATGGGA ACTTGGATTA
ACGGAAGTTC ATCGCTCTTT ATTAGAAAAT GGTCTTCGCG AAAGGGTTTT ATTAAGAGCA
GATGGAGGTC TAAAGACAGG CTGGGATGTG GTCATAGCAG CTTTACTTGG AGCAGAAGAA
TATGGCTTTG GAACAGTCGC AATGATTGCC GAAGGTTGCA TAATGGCGAG GATTTGCCAC
ACAAACAAAT GTCCAGTCGG TGTAGCAACT CAGCAAGAAG GCTTAAGAAA AAGATTCCCT
GGATTACCTG AACATGTCGT TAACTTTTTC ATCTTCGTAG CTGAGGAAGT CAGACAATTG
ATGAGTCAAG TTGGAGTAGC AAAAGTCGAG GATCTAATTG GAAGAACAGA TCTATTAATC
CCACGGAATA TAGACTTAAC AAAAACAAAA AAAGTTGACC TATCTAGCCT TCTCAAACCT
ATAGATAACC CAACAGATCG TTCATGGTTA AGCCACGAAA TTGAAGCTCA TAGCAATGGA
GAGGTTCTTG AAAATGCCCT ACTCAAAGAT AAAGAAGTTT CTAATGCAAT TCAAACTCAG
GGAAGTATTA CTAAAGAAAT TCCTATTGTT AATACAGATA GAAGTGTTTG TGCACGAATC
TCTGGAGAGA TAGCTAAAAA ATATGGAAAT AAAGGTTTTA ATGGGAATTT AAATTTGATA
TTTAAAGGTT CAGCGGGGCA AAGCTTTGGT GCATTTATTT TAAAAGGAAT GAATATTTCT
TTGATTGGAG AAGCTAATGA TTATGTAGGA AAAGGCATTA ACGGAGGTTC CATTACGATT
GTTCCTGAAA TTATTAATGA CACATCTAAC ACTCAGGTGA TACTTGGCAA CACATGTCTA
TATGGAGCAA CTGGTGGAAA ATTATTCGCC CTTGGAATAG CTGGGGAACG TTTTGGTGTT
CGCAATAGTG GAGCTCATGC TGTTATTGAA GGAGCTGGAG ACCATTGTTG CGAATATATG
ACTGGAGGAG TAGTTGTTGT GCTTGGAAAA ACTGGAAGAA ATATAGGAGC AGGAATGACT
GGAGGCATAG CTTTTATTCT TGATAAAAAA AATGAACTTG ACTTAAGAAT GAATAAAGAA
ATTGTTGAGG TCCATCCTCT AACTGCAACT AACCATGAAC AATTCTTAAA TGACTTAATT
TATGAATATC ATCAGAAAAC GAAAAGTCCA TTAGCACAAA AGATTCTCGC AGACTGGTCT
TCATGGAAGG AATTATTTAA AGCAGTAGTT CCTCCAAGCG AAAAAAGTAA ACTAGGTATT
GAGGAAGTGC TTGAGAAAGC TACAATTTAG
|
|---|
| Protein sequence | MHQRISRSNW PYCDSTYPDA FSGEKDSCGV GFIASVEGKQ NHWVLTQALR GLSCMEHRGG
CGGDSDSGDG AGILCEIPWS YFKQVWDKAK HCEPQASGIG MIFMPKDLKN RELAKKICEQ
EAESLGLTSK GWRDVPVHEE VLGKLARENE PFITQWIVDI KDKEINLEAL LFRLRQRISN
RANIELKEDE LGLYICSLSS KTIVYKGMVR SEILAPFYND LKDDRFEVSY AVYHRRFSTN
TLPKWPLAQP MRLLGHNGEI NTLLGNINWA KATETDISSV WKENANDLKP IVDNLYSDSA
NLDLNLELLV RSGRPITDSL LTLIPEAFRD QPELINKPEI TAFYEYAAGT QEPWDGPALI
VFTDGTNIGA TLDRNGLRPA RYCITKNGYV VMGSETGVVE LEEDVIQEKG RLGPGQMLAV
DLESKRILRN WDVKEESANR YPYLDWLKAN RINLNNQSWE INNKFDKQKL LQYQIAFGFS
AEDFDYIINS MAANAKEPTY CMGDDIPLAI LSNKSHILYD YFKQRFAQVT NPPIDPLREK
LVTSLEMNLG VRKAPLRPKE ESARLIHLES PILNEKELNS IKNSELSCKQ ISTLIPINDD
KIILEEGLKN LCKEAEDSVI NGREILILSD RDINRENSYI PPLLAVGAVH HHLLRKGLRL
KTSIIIDTAQ CWSTHHIACL IGFGASAICP WLTWETTRHW WQLPKTQKLI SDGKLSNLSI
EIAQDNVKKA MEDGLRKILS KIGISVLASY HGAQIFEAIG IGADLIDLAF KGTTSRIAGL
TLSELSIETI SFHKKAFPEL EQKKLDFNGF VQYRNSGEFH LNNPEMSKIL HAAVKAGPEY
DHFKTYQQLL ENRPATTLRD LLTFKTATQP LPLDQIESVE NICQRFCTGG MSLGALSREA
HEVLAIAMNR IGGKSNSGEG GEDPARFNVL EDVDENNQSK TLPNLKGLLN GDTACSAIKQ
IASGRFGVTP EYLTSGKQLE IKVAQGAKPG EGGQLPGPKV DEYIARLRNS KPGVALISPP
PHHDIYSIED LAQLIHDLHQ INPTAKVSVK LVAEIGIGTI AGGVAKANAD VIQISGHDGG
TGASPLSSIK HAGLPWELGL TEVHRSLLEN GLRERVLLRA DGGLKTGWDV VIAALLGAEE
YGFGTVAMIA EGCIMARICH TNKCPVGVAT QQEGLRKRFP GLPEHVVNFF IFVAEEVRQL
MSQVGVAKVE DLIGRTDLLI PRNIDLTKTK KVDLSSLLKP IDNPTDRSWL SHEIEAHSNG
EVLENALLKD KEVSNAIQTQ GSITKEIPIV NTDRSVCARI SGEIAKKYGN KGFNGNLNLI
FKGSAGQSFG AFILKGMNIS LIGEANDYVG KGINGGSITI VPEIINDTSN TQVILGNTCL
YGATGGKLFA LGIAGERFGV RNSGAHAVIE GAGDHCCEYM TGGVVVVLGK TGRNIGAGMT
GGIAFILDKK NELDLRMNKE IVEVHPLTAT NHEQFLNDLI YEYHQKTKSP LAQKILADWS
SWKELFKAVV PPSEKSKLGI EEVLEKATI
|
|---|
| |