Gene PMN2A_1072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1072 
Symbol 
ID3606459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand- 
Start bp1563081 
End bp1563743 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content38% 
IMG OID637687942 
ProductATP-dependent protease La (LON) domain 
Protein accessionYP_292265 
Protein GI72382910 
COG category[R] General function prediction only 
COG ID[COG2802] Uncharacterized protein, similar to the N-terminal domain of Lon protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.281275 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCGAAC TTTCAGTTAG GGAGCTACCA CTTTTCCCAT TGCCTGAGGT TGTGCTTTTT 
CCTCAGGAGT ATTTGCCACT TCATATTTTT GAGACTCGTT ACAGAGTTAT GCTTCAATCT 
GTGTTGAAAT CGGATAGCCG TTTTGGAGTA GTTAGATGGG ATCCAATTGC AAAAAAAATG 
GCAGATGTAG GTTGTTGCGC TGAGATTATT AAGCATCAAA CTTCACAAGA TGGTAGAAGT 
AATATTGTGA CTATTGGACA GCAAAGATTT CGAATTCTTG AAATTATTAG TGAAACTCCA 
TTTATTAACG CACTAGTTAG TTGGGTCGAT GATGAACAAA TCTCAGATCA AACCAAACTA 
TTGGAACTAA AGGATTCAGT ATCAATTGCT CTAAAGGATG TAGTTTCACT TACCTCAAAA 
TTAACTGAAT CTGAGAAAGA ACTTCCTGAT TCTTTGCCTG ACATTCCAAG AGAATTGTCT 
TTTTGGATAG CTGCTCATCT TGGCGGTCCA GTAGCAAACG AGCAGCAAAA TCTATTAGAA 
ATAACAAATA CGTTTCAACG TTTGGAAAGA GAATATGAAC TGCTTGATCA CACAAGAAAG 
CAACTAGCTG CCAGAACTGC TTTAAAAGAT ACTTTCTCAA ACGCCGATCA AGCCAACAAT 
TAA
 
Protein sequence
MSELSVRELP LFPLPEVVLF PQEYLPLHIF ETRYRVMLQS VLKSDSRFGV VRWDPIAKKM 
ADVGCCAEII KHQTSQDGRS NIVTIGQQRF RILEIISETP FINALVSWVD DEQISDQTKL 
LELKDSVSIA LKDVVSLTSK LTESEKELPD SLPDIPRELS FWIAAHLGGP VANEQQNLLE 
ITNTFQRLER EYELLDHTRK QLAARTALKD TFSNADQANN