Gene PMN2A_1062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1062 
Symbol 
ID3606449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1552998 
End bp1553510 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content42% 
IMG OID637687932 
Producthypothetical protein 
Protein accessionYP_292255 
Protein GI72382900 
COG category[R] General function prediction only 
COG ID[COG3180] Putative ammonia monooxygenase 
TIGRFAM ID[TIGR03082] membrane protein AbrB duplication 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.836162 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCCTC CGATGACTTT GATCATATAC ATTCTAAGTG GAGCGGCTCT AGGAAGTTTG 
ATGCTCCTAA GCGGCATTCC TGCAGCTCCT CTTCTAGGCT CGATTTTGGC AGCAGGATGC
CTAAGCATAA GTGGACAATT CGAACCTGCT CAATGGCCTA TAGGTACAAA AACTTTGCTT
GGTATTGGTG TAGGTACTGT TATTGGTACT GGTATAAATA GAGATACTCT TACAGAATTA
CAAACTCTTT GGAAGCCAGC CATCTTGATC ACAATTACTT TAATTCTAAC CGGTCTAGTT
GTTGGATTTT TAGTAGTTCG TCTGTTTGGA ATTGATCCTT TAATAGCTTT ACTAGGATCT
GCTCCTGGAG GAACACTCGG CATGAGCCTA GTTGGTGCAG AACTTGGAGT AGGAGCTGCA
GTGGCAGCAA TTCATGCGTT TAGATTAATA GCGGTTTTAT TGATTACTCC AGCTGTTGTT
AGGTATTTAG CCCCAATCGT TAAAGCTAAT TAA
 
Protein sequence
MNPPMTLIIY ILSGAALGSL MLLSGIPAAP LLGSILAAGC LSISGQFEPA QWPIGTKTLL 
GIGVGTVIGT GINRDTLTEL QTLWKPAILI TITLILTGLV VGFLVVRLFG IDPLIALLGS
APGGTLGMSL VGAELGVGAA VAAIHAFRLI AVLLITPAVV RYLAPIVKAN