Gene PMN2A_1046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1046 
Symbol 
ID3606433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand- 
Start bp1540280 
End bp1541395 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content35% 
IMG OID637687916 
Productputative membrane protein of urea ABC transport system 
Protein accessionYP_292239 
Protein GI72382884 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID[TIGR03408] urea ABC transporter, permease protein UrtC 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.812032 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATTT TTTCTACAAA AAAAAGTTGG ATTTGGGTTC TAATCATTGC ATTAATTATT 
GCTGCTCCTG CATTACTTCC TGTCTTTAGA TTAAATCTCT TAGGTAGATA TTTATCTCTT 
GCAATAGTGG CCCTAGGAGT TGATTTGATT TGGGGATTCA CAGGAATGTT GAGCTTAGGG 
CAAGGAATTT TCTTTGCTCT TGGTGGATAT TGCGCTGCAA TGTTCCTCCA ATTGAATAGT 
TCAGGAGAAT TTCCAAATGG TATCCCTGAG TTTTTTGGTT TATATGGAGT CGAAAAACTT 
CCATTTTTTT GGGAACCTTT TAAAAGTTCA ATTTTTACTC TTATTTCCAT TTGGTTGCTA 
CCAGCAATAA TTGCTGGTCT TCTAGGTTAT TTAGTTTTTA GAAATAGAAT TAAAGGTGTT 
TATTTTTCGA TCCTTACACA AGCGGCTCTT TTAGTTTTTT TCAATTTCTT TAATGGTCAA 
CAGAAATTGA TTAATGGAAC AAATGGTTTA AAAACAGACG TGACTCAACT TTTTGGACAA 
ATGGTAGGTT CTGAAATAAT GCAAAGATGG TTCTTTTGGA TATCAGCTAT TTTAGTGATA 
CTTGCATGGT TTTTTGCGAG GTGGATTGTT CGAGATCGAT TTGGAAATAT CCTTATTGGA 
ATTAGAGATG ATGAAGCTCG AGTTCGTTTC ACTGGATATA ATCCAGTAAT TTTTAAAACA 
ATAATTTTCT CAATAGCAGG AGGCTTAGCT GGTATTTCAG GGGCTTTGTA TACAGTTCAA 
TCTGGAATAG TTTCGCCTCA ATTTATGACT GTCCCGTTCT CTATCGAAAT GGTTGTTTGG 
GTTGCCGTTG GGGGCAGAGG AACTTTACTA GGCGCAATTC TTGGGGCTGT TTTTATTAAT 
TATGCAAAAA GTTTAGTGAG TGAAGCATTA CCAGCAAGTT GGATGTTTAT TCAAGGTGGA 
TTATTTATTC TTGTTGTAAC AGCTCTCCCA GAAGGGGTAC TTGGATGGAT CCGAAAGGGA 
GGTCTAAAGA AATTACTCTT TTTAATTGGA ATTAATAAAA AACTGGAGAC ATATCCAAGT 
CTTGAAGTTA ATGAACAAGG TGAGGTGAAA TCATGA
 
Protein sequence
MSIFSTKKSW IWVLIIALII AAPALLPVFR LNLLGRYLSL AIVALGVDLI WGFTGMLSLG 
QGIFFALGGY CAAMFLQLNS SGEFPNGIPE FFGLYGVEKL PFFWEPFKSS IFTLISIWLL 
PAIIAGLLGY LVFRNRIKGV YFSILTQAAL LVFFNFFNGQ QKLINGTNGL KTDVTQLFGQ 
MVGSEIMQRW FFWISAILVI LAWFFARWIV RDRFGNILIG IRDDEARVRF TGYNPVIFKT 
IIFSIAGGLA GISGALYTVQ SGIVSPQFMT VPFSIEMVVW VAVGGRGTLL GAILGAVFIN 
YAKSLVSEAL PASWMFIQGG LFILVVTALP EGVLGWIRKG GLKKLLFLIG INKKLETYPS 
LEVNEQGEVK S