Gene PMN2A_1045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1045 
Symbol 
ID3606432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1539531 
End bp1540283 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content37% 
IMG OID637687915 
ProductATPase 
Protein accessionYP_292238 
Protein GI72382883 
COG category[R] General function prediction only 
COG ID[COG4674] Uncharacterized ABC-type transport system, ATPase component 
TIGRFAM ID[TIGR03411] urea ABC transporter, ATP-binding protein UrtD 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTCTC CATTGCTAGA GCTAAAAAAA ATCTCAGTTA GCTTTGAGGG ATTTCTTGCT 
CTTAGAGATC TTGATCTGGT TTTGAATAAA GGCGATCTTA GAGCCGTTAT TGGTCCCAAT
GGTGCAGGTA AAACTACATT TTTAGATGTA ATTACTGGCA AAGTATTACC GACAAAAGGT
GATGTGATTT TTAAAGAAAA ATCGTTGCTT GGTCAAAAGG AGTTTCGTAT AGCGCGTAAA
GGGATTGGAA GAAAATTTCA AAGTCCTAGG ATATTTGAAA ATCTATCTGT ACAAGAAAAC
CTAGCTCTAT CAGTTAGCAG GCCTAAAACT CCTTTTTCAT TATTGATTGA TAATTTAAAG
GTTAAGCATT TAGATCAAAT TCAACATTTG ATGAGTATTG TCAACCTTCA ATCAAAAGCC
AATATCAGGG CGGGAGCTCT CTCTCATGGC CAAAAACAAT GGCTTGAGAT TGCTATGCTA
GTTGGACAAG ACCCTGACCT GTTACTTGTT GATGAACCTG TGGCTGGCTT GACTGATGAA
GAAACAGATT TAACTGCTGA TCTTCTTAAA TCTCTAGCGG GTGATCATAC TGTTTTAGTT
ATTGATCATG ATATGGAATT TATTCGTAGA CTTGATTGCC CTGTGAGTGT TTTACACCAA
GGATATGTAT TGAAGGAAGG CTCTATGAGC GAAATACAAA AAGATCCTTT GGTGATAGAG
GTTTATCTAG GACAATCTGA GGAGGAAGAA TAA
 
Protein sequence
MSSPLLELKK ISVSFEGFLA LRDLDLVLNK GDLRAVIGPN GAGKTTFLDV ITGKVLPTKG 
DVIFKEKSLL GQKEFRIARK GIGRKFQSPR IFENLSVQEN LALSVSRPKT PFSLLIDNLK
VKHLDQIQHL MSIVNLQSKA NIRAGALSHG QKQWLEIAML VGQDPDLLLV DEPVAGLTDE
ETDLTADLLK SLAGDHTVLV IDHDMEFIRR LDCPVSVLHQ GYVLKEGSMS EIQKDPLVIE
VYLGQSEEEE