Gene PMN2A_1038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1038 
Symbol 
ID3606425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1533842 
End bp1534915 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content44% 
IMG OID637687908 
ProductWD-40 repeat-containing protein 
Protein accessionYP_292231 
Protein GI72382876 
COG category[R] General function prediction only 
COG ID[COG2319] FOG: WD40 repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGGTA TAGAAGCATT TAGTCCCAAG GGAATGCTTC ATGAATGTTG GTCTGCTCAA 
GCTAACGACT ACGCGATTGT CTGCGGCTGG GCACTACAAG GTAAAACTTT TTTAGTAGGT
GATGTCGCTG GTGGGCTTTA TGCATTTGAG GGAATATCTG GAAAGCTCAT TTGGCAAATA
AAAGACATAC ATAAAGGTGG CTTACTCGCA ATGTCTATAC ATCCAAATGG AAAGACTTTT
GCAACTGCTG GCCAAGATGG ACATGTAAAT ATATGGGAAA GCCAAAAGGG TACGTCAACT
AAAACTTTGG AACTTGGGAA AGGATGGGTT GAGCACATCA AGTGGTCCCC AGACGGAAAA
TTTTTAGCTG TAGTTTTTAC TAAATACGTC TATGTTTTTG ATGATAAAGG TCAAGAACAT
TGGCGATCAG AGGAGCATCC CAGTACTGTC AGCGCGATTG CTTGGTCTAA TTCAAATGAA
TTAGCAACAG CATGCTATGG CCAAGTCACT TTTTTTGATG TAGTAAATGA CAAGATCAAT
CAAAAGTTGG AATGGCGAGG CTCACTAGTA TCTATGGTGC TTAGTCCAGA TGGAGACATA
GTGGCATGCG GCAGCCAAGA TAATTCTGTT CATTTCTGGC GTCGTTCAAC TGATCAAGAT
TCAGAGATGA CAGGCTACCC AGGTAAACCA AGTCACCTAG CTTTTGATCA AACCGGCACA
GTCCTTGCTA CTGGGGGTAG TGATCGCGTG ACGGTTTGGA GTTTTCAAGG CGATGGTCCT
GAGGGAACTG TACCAGGAGA GTTAATGCTT CATACGGAAC CCATTTCATG TCTTGCTTTC
TCACACAGCG GGATGCTTTT AGCTTCTGGC TCGAGAGATG GTTCAGTTTT TTCTTGGTTT
CTCCAAAAAG ATGGTCAGGG TGATCCAGTT GGTGGTGCAT TTGCCGGTGA CCTTGTAAGC
CAAATCGCTT GGCACCCTGA TGACACTGCC TTGGCTGCAA TAAATGCAAA CGGAGGAATT
ACGGTTTGGG AGTTTAAGGT TCGGACGAAA ACGTCACCTC AAGGATTCGG ATAA
 
Protein sequence
MSGIEAFSPK GMLHECWSAQ ANDYAIVCGW ALQGKTFLVG DVAGGLYAFE GISGKLIWQI 
KDIHKGGLLA MSIHPNGKTF ATAGQDGHVN IWESQKGTST KTLELGKGWV EHIKWSPDGK
FLAVVFTKYV YVFDDKGQEH WRSEEHPSTV SAIAWSNSNE LATACYGQVT FFDVVNDKIN
QKLEWRGSLV SMVLSPDGDI VACGSQDNSV HFWRRSTDQD SEMTGYPGKP SHLAFDQTGT
VLATGGSDRV TVWSFQGDGP EGTVPGELML HTEPISCLAF SHSGMLLASG SRDGSVFSWF
LQKDGQGDPV GGAFAGDLVS QIAWHPDDTA LAAINANGGI TVWEFKVRTK TSPQGFG