Gene PMN2A_1035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1035 
Symbol 
ID3606422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1530543 
End bp1532090 
Gene Length1548 bp 
Protein Length515 aa 
Translation table11 
GC content38% 
IMG OID637687905 
ProductABC-type metal ion transport system periplasmic component 
Protein accessionYP_292228 
Protein GI72382873 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.22429 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTTTTAA CGTTGAATTT TTCAAATCAG TCCAAAAAGG TTAAACCCAT AATCAATAAA 
ACAGTTCTCA AAAGTTCTCT TGTTGCTGGA GCATTTTTAT TTTCTGGAAT CAATCAGACA
GCGCAAGCAA ATACAAAATC AATTGTTGCT GTAGAGCCAT TGGTTTGCGA TGTTGTATCT
GCGATTGCAC CACCCTCTAC GCCCGTGACC TGCTTAATTG ACAGAAAGCA AGATGTTCAT
GATGTCAAGA TCACTCCAAG GCAAGCTCAA ACACTAAAAA GTGCGAATCA AGTATTTACT
CTTGGTTCAG AGATGACCCC TGCAATTAAA AAATGGTTGG ATAATCCTTT AACTGTTGTC
GTTGGTGTAA GTGCAATAGA AATAGACGAT CATGACGACC ACGATGATCA TGACGATCAT
TCAGCTGCTA AGCATGATGA TCATGACGAC CACGATGATC ATGACGATCA TTCAGCTGCT
AAGCATGATG ATCATGACGA CCACGATGAT CATGACGATG CCCATGGAGA GGGAGCTTTT
GAATGGGCTG GTGTTTTTGA TCTTTCCGCA GGAGTCTACA AATGGTCTTT CGCCAAAGTT
GATGGAGACT ATGCTGATCC TGCGATGAAA ATGGTTATTC TTAAGTCTGG TGATATTGAA
GCATCAGAAG AGCTTGCTAA AGAATTATTA GGATCCAAAA ATTCAGAAGT TAAGCGCAAT
AATGACAAAC TTATTGCGCA GGACAAAGCC TACCTTCTTA CATTTAATGA AAAGAAAGAC
ATCACAACAT TTACTGTAGA AATCAAAAAA TCTGGTAAAT ACGCTTTCTT TACTGAGCAT
ATGCCGTTTG AGTTTGAAGC CGATGAACAT TTCTTTAAAG ATGTTTCAGG CGACGATGTG
GAACCGATTT CCCAAGTACC AGATGAAGGA GATCATCATC ACCATGACCA TGGAGGCTTA
GATCCTCATA TTTGGCATGA TCCACATAAC ATCATCAAGA TGGGAAATGT AATTTCTAAA
AATATCAACA AAAAGATTTC ATTCTTTGAT AGAGAAACTA AAAAAGTTTT AAAAGAAAGA
ACTCAATCTG TAAATTCCAT TTTGAAAGAT CTAGATCAAT GGACTCAAGA ACAAATAGCT
ACTATTCCTT CTGATCAAAG GACGATGGTT TCTAAGCACA AAGCCATGGA ATATTATGGA
GATGCATTTG GATTGAAGAC CATGAGCCTA CTAGATTTTC TTGGTGATTC ATCCAGCCTT
AGGCCTCAAA CTATTTCAAC TGTATTAGCT GAGCTTAAAG AAGAAAACGT GAAAGTTTTA
TTCGCTGAGC AAAAGCCTCC TTCAAAGCTA TTGAGAAACC TCAGTAGACA AACTTCCACT
CCTATCGCAT CAAATCAAAT CTATGTTGAC GGTCTAATGC CAACAGGGAA TACTGTTTCA
GTTGCTGTAC ATAACACCTG CACAATTGTT AATTCACTTG GTGGAGAATG TGATGAGCAA
GAGGGCGATG AACTTGAGGG GAAATGGAAT TCTTTAACTA ATCCTTAA
 
Protein sequence
MFLTLNFSNQ SKKVKPIINK TVLKSSLVAG AFLFSGINQT AQANTKSIVA VEPLVCDVVS 
AIAPPSTPVT CLIDRKQDVH DVKITPRQAQ TLKSANQVFT LGSEMTPAIK KWLDNPLTVV
VGVSAIEIDD HDDHDDHDDH SAAKHDDHDD HDDHDDHSAA KHDDHDDHDD HDDAHGEGAF
EWAGVFDLSA GVYKWSFAKV DGDYADPAMK MVILKSGDIE ASEELAKELL GSKNSEVKRN
NDKLIAQDKA YLLTFNEKKD ITTFTVEIKK SGKYAFFTEH MPFEFEADEH FFKDVSGDDV
EPISQVPDEG DHHHHDHGGL DPHIWHDPHN IIKMGNVISK NINKKISFFD RETKKVLKER
TQSVNSILKD LDQWTQEQIA TIPSDQRTMV SKHKAMEYYG DAFGLKTMSL LDFLGDSSSL
RPQTISTVLA ELKEENVKVL FAEQKPPSKL LRNLSRQTST PIASNQIYVD GLMPTGNTVS
VAVHNTCTIV NSLGGECDEQ EGDELEGKWN SLTNP