Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_1023 |
Symbol | nusA |
ID | 3606409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | + |
Start bp | 1518516 |
End bp | 1520009 |
Gene Length | 1494 bp |
Protein Length | 497 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637687892 |
Product | transcription elongation factor NusA |
Protein accession | YP_292216 |
Protein GI | 72382861 |
COG category | [K] Transcription |
COG ID | [COG0195] Transcription elongation factor |
TIGRFAM ID | [TIGR01953] transcription termination factor NusA |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCTTG TTCTACTCCC AGGCTTAAAT AACTTAATTG AAGACATTAG TGAGGAAAAA AAGCTTCCAT CACAAGTCGT CGAAGCTGCT TTGAGAGAAG CACTTCTAAA AGGTTATGAA CGATATCGAA GAACTCTTTA TTTAGGTATC AGCGAAGATC CTTTTGAAGA AGATTATTTC AGTAACTTTG ATGTTGGTTT AGATCTAGAA GAGGAGGGGT ATAGAGTTTT AGCCAGTAAA ATAATAGTTG AGGATGTAGA GAGTGATGAT CATCAAATAG CAATAGCAGA GGTTATGCAA GTTGCTGATG ATGCTCAAGT TGGCGATACC GTTGTACTAG ATGTGACTCC AGAGAAAGAA GATTTTGGAA GAATGGCTGC GGCTACAACC AAGCAGGTTT TAGCCCAAAA ATTGAGAGAT CAGCAAAGAA GAATGATTCA AGAGGAATTT GCTGACCTAG AAGATCCAGT GCTAACTGCC AGGGTCATTA GATTTGAAAG GCAATCAGTA ATCATGGCAG TAAGCTCTGG TTTAGGTAGA CCAGAAGTAG AAGCAGAGCT TCCAAGACGA GATCAATTGC CAAATGATAA TTACCGAGCA AACGCAACAT TTAAAGTATT TCTTAAAGAA GTTAGTGAAA CACCTAGGAG AGGGCCTCAA CTTTTTGTTA GCAGGTCAAA TGCTGGATTG GTTGTATATC TGTTTGAGAA TGAAGTTCCT GAAATTCAAG AAGGTTCAGT ACGTATAGTT GCTGTTGCTC GTGAAGCAAA TCCCCCTTCA AGAGCAGTAG GTCCCAGAAC AAAAGTAGCT GTTGACAGTA TTGAAAGAGA GGTTGACCCC GTTGGAGCAT GTATTGGTGC AAGAGGTGCT CGAATTCAAC AAGTTGTAAA TGAACTTCGT GGAGAAAAAA TAGATGTAAT TCGTTGGTCT TCAGACCCTG TTCAATACAT CTGTAATTCA TTAAGTCCTG CAAGAGTTGA AGTAGTTAGA CTTGTGGATC CAGAAGGTCA GCATGCTCAT GTCTTAGTTC CTCCAGATCA ACTTAGCCTC GCAATTGGTA GAGAAGGGCA AAATGTAAGA CTTGCTGCAA GGCTTACAGG ATGGAAAATA GATATCAAAA ATTCACAAGA ATATGATCAA GCCACTGAAG ACTCGGAGGT TGCGGAATTA ATTTCTCAAA GAGAAGAAGA AGAATCTTTA CAGAGAGAAG CTGAGAAGAG ATTAGAGGCA GAACAGACAG CTAGAGCTGA GGAAGATGCA CGCCTAAGAG AGCTATACCC CCTCCCAGAG GATGAAGAAG ACTTTCAAAA TGAGGAATTG TCAAACATCG ATAGCAATGA AACAGAATCT GAATCTGATT TTGAATCTTC TGAAATTGAT TCAAATATCG ATACTGATGA CGCTGAAACC GAAGAAAGTG ATATTGATGA AACAATCGAA GACACAGTTA CTGCTAAAGA TAAAATAATT ACAGAAGAGG AAGGAACCCG GTGA
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Protein sequence | MALVLLPGLN NLIEDISEEK KLPSQVVEAA LREALLKGYE RYRRTLYLGI SEDPFEEDYF SNFDVGLDLE EEGYRVLASK IIVEDVESDD HQIAIAEVMQ VADDAQVGDT VVLDVTPEKE DFGRMAAATT KQVLAQKLRD QQRRMIQEEF ADLEDPVLTA RVIRFERQSV IMAVSSGLGR PEVEAELPRR DQLPNDNYRA NATFKVFLKE VSETPRRGPQ LFVSRSNAGL VVYLFENEVP EIQEGSVRIV AVAREANPPS RAVGPRTKVA VDSIEREVDP VGACIGARGA RIQQVVNELR GEKIDVIRWS SDPVQYICNS LSPARVEVVR LVDPEGQHAH VLVPPDQLSL AIGREGQNVR LAARLTGWKI DIKNSQEYDQ ATEDSEVAEL ISQREEEESL QREAEKRLEA EQTARAEEDA RLRELYPLPE DEEDFQNEEL SNIDSNETES ESDFESSEID SNIDTDDAET EESDIDETIE DTVTAKDKII TEEEGTR
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