Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_1015 |
Symbol | |
ID | 3606401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | - |
Start bp | 1507841 |
End bp | 1509748 |
Gene Length | 1908 bp |
Protein Length | 635 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637687884 |
Product | DNA-directed RNA polymerase subunit gamma |
Protein accession | YP_292208 |
Protein GI | 72382853 |
COG category | [K] Transcription |
COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
TIGRFAM ID | [TIGR02387] DNA-directed RNA polymerase, gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0443179 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAATA GCAATCTACG TACGGAAAAT CATTTTGATT ATGTAAAAAT AAAATTAGCA TCGCCTGAAA GAGTAATGGA GTGGGGGCAA AGGACTTTGC CTAATGGTCA GGTTGTAGGG GAAGTAACTA AGCCAGAAAC AATAAATTAT CGAACACTAA AGCCTGAAAT GGATGGGTTG TTTTGTGAAA AGATTTTTGG TCCGTCCAAG GATTGGGAAT GTCATTGTGG GAAATATAAG AGGGTTAGAC ATCGTGGAAT TGTTTGCGAG AGGTGCGGTG TTGAAGTAAC AGAAAGTCGG GTTAGGAGAC ATAGAATGGG ATTTATTAAA TTAGCAGCTC CTGTATCACA TGTTTGGTAT CTAAAAGGTA TTCCTAGCTA TGTAGCTATT TTGTTAGATA TGCCTCTTAG AGATGTTGAG CAAATCGTTT ACTTTAATTG TTATGTGGTT TTAGATATTG GAGATAGTAA AGATTTAAAA TATAAGCAGC TATTAACAGA AGATGAATGG CTTGAGATTG AAGACGAGAT TTATGCTGAG GATTCAACTA TTGAGAATGA ACCCATCGTT GGCATAGGTG CAGAGGCCTT AAAACAATTA CTTGAAGATT TAAATTTAAA AGAAGTTGCT GAGCAATTAC GAGAAGATAT TGCTACAAGT AAAGGTCAAA AAAGGGCTAA GCTTATAAAA AGGCTAAGGG TAATAGATAA CTTTATTGCT ACAAGCGCAA GTCCAGAATG GATGGTTTTA GATGCGATAC CTGTAATACC TCCTGATTTG AGGCCTATGG TGCAACTAGA TGGAGGTAGA TTCGCTACCT CAGATTTAAA TGATTTATAT AGAAGAGTAA TCAATAGGAA CAACCGTCTT GCTCGTCTTC AGGAAATACT AGCTCCGGAA ATAATAGTTA GAAATGAAAA AAGGATGCTA CAAGAGGCTG TAGATGCACT TATTGATAAT GGTAGAAGGG GAAGAACTGT TGTTGGCGCA AATAATCGCC CCTTGAAATC ATTAAGCGAT ATTATCGAGG GTAAGCAAGG TAGATTTAGA CAGAATTTGC TTGGGAAAAG AGTTGATTAT TCAGGTCGCT CGGTAATAGT AGTTGGCCCC AAGTTAAAAA TGCATCAATG TGGATTGCCA AAGGAAATGG CGATAGAACT TTTTCAGCCT TTTGTAATTC ATCGATTGAT TCGCCAGAAC ATTGTCAATA ACATCAAAGC TGCAAAGAAA TTGATACAGA AAGCAGACGA TGAAGTAATG CAGGTATTAC AGGAAGTCAT AGAGGGTCAT CCTATCCTGC TTAACCGTGC TCCTACTTTG CACCGATTAG GCATTCAAGC TTTTGAACCT AAATTAGTTG CTGGACGAGC TATACAGCTA CATCCATTGG TATGTCCAGC TTTTAATGCT GATTTTGATG GAGATCAAAT GGCTGTTCAT GTGCCTTTGG CAATTGAAGC GCAAACAGAA GCAAGGATGT TAATGCTAGC GAGTAACAAT ATTCTTTCCC CTGCAACTGG GGATCCAATA GTTACCCCAT CTCAAGATAT GGTTTTAGGG TCTTACTACC TTACTGCAAT TCAGCCTCAA TCAAAGCAGC CGAAGTTCGG AGATTATTCA AATACCTATG CATCACTTGA GGACGTTTTA CAAGCTCTTG AAGATAAAAG AATAGATTTA CATGATTGGG TTTGGGTTCG ATTTTCTGGT GAAATTGAGG ATGACGATGA GCTTCAGAAT CCGCTTAAGT CAGAGACTTT GAAAGACGGT ACCCGTATTG AGGAATGGAC ATATCGACGT GACCGATTAG ATGAAGATGG AAGTTTAATT AGCCGTTATA TATTGACTAC TGTTGGTCGA GTCGTAATGA ACCATACAAT TATTGATGCC GTAGCAGCCA CCTCGTAA
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Protein sequence | MTNSNLRTEN HFDYVKIKLA SPERVMEWGQ RTLPNGQVVG EVTKPETINY RTLKPEMDGL FCEKIFGPSK DWECHCGKYK RVRHRGIVCE RCGVEVTESR VRRHRMGFIK LAAPVSHVWY LKGIPSYVAI LLDMPLRDVE QIVYFNCYVV LDIGDSKDLK YKQLLTEDEW LEIEDEIYAE DSTIENEPIV GIGAEALKQL LEDLNLKEVA EQLREDIATS KGQKRAKLIK RLRVIDNFIA TSASPEWMVL DAIPVIPPDL RPMVQLDGGR FATSDLNDLY RRVINRNNRL ARLQEILAPE IIVRNEKRML QEAVDALIDN GRRGRTVVGA NNRPLKSLSD IIEGKQGRFR QNLLGKRVDY SGRSVIVVGP KLKMHQCGLP KEMAIELFQP FVIHRLIRQN IVNNIKAAKK LIQKADDEVM QVLQEVIEGH PILLNRAPTL HRLGIQAFEP KLVAGRAIQL HPLVCPAFNA DFDGDQMAVH VPLAIEAQTE ARMLMLASNN ILSPATGDPI VTPSQDMVLG SYYLTAIQPQ SKQPKFGDYS NTYASLEDVL QALEDKRIDL HDWVWVRFSG EIEDDDELQN PLKSETLKDG TRIEEWTYRR DRLDEDGSLI SRYILTTVGR VVMNHTIIDA VAATS
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