Gene PMN2A_1011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1011 
Symbol 
ID3606397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1500612 
End bp1502363 
Gene Length1752 bp 
Protein Length583 aa 
Translation table11 
GC content40% 
IMG OID637687880 
ProductNa+/proline symporter 
Protein accessionYP_292204 
Protein GI72382849 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0591] Na+/proline symporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATTAA TTGATTGGTT TATTTTATTT GTTTATTTGA TCTTTTCCTT GGTATTAGGA 
ATTTATATAT CTCTAAAAAA TCATAATGAA GCAGACTATT TTGTTGCTGG TCGTCGTCTT
AATGGATTGC TTGCAGGTAT GTCTATGGCT GCAACAACGT TTTCGATTGA CACACCTCTT
TATGTGGCCG GAGTTATTGG GACTCGAGGC TTGGCAGGAA ACTGGGAGTG GTGGAGTTTT
GGCCTTGCTC ATGTTGCTAT GACGGTTATA TTCGCTCCAC TGTGGAGGCG TAGTGGAGTA
TTGACTGACG CAGCCTTTAC TGAATTACGT TATGGGGGGC AAGCAGCAGC TTACTTAAGA
GGTATAAAAG CTTTTTTACT CTCAGTTCCA ATCAATTGTA TTGGGATTGG TTATGCTTTC
TTAGCAATGC GTAAAGTGGC TGAATCATTA GGTGTGGTAG ATGGACATAT TGTATTCGGA
CCCTTTACTG ACACGATACT TTTAATGATT TTAGTTGCTT TGTTTTTGCT TGTTTACACT
GTACTAGGCG GACTTTGGGC AGTAGTCGTT AATGATTTTG TACAACTTGT ATTAGCTCTT
TTAGGCGCAT TTGCTGTTTG CTTTGTGGCA CTTGATGCTT CAGGTGGTAT GACGAATTTG
TTAACAAAGT TAGAGGCATT AGATCGACCT GAGCTGCTTT CTTTATTTCC ATGGACATTC
AACAAAAATG GTTTCAATTG GTTGGATAGC TCAGGAATAA GTATTACTAC TTTCTTCGCT
TTTATTTCTT TGCAGTGGTG GAGTTTCAGA CGTAGTGATG GTGGTGGGGA ATTTATTCAA
CGTTTATTGG CTACAAAAGA TGAAAAACAA GCAACTTTGG CAGGAATAGT TTTTTTAATT
GTTAATTATC TTGTTCGCAG TTGGCTTTGG ATTTTAGTTG GCTTAGCTGG TTTAGTCCTC
TTGCCTCAAC AAGCTGACTG GGAATTAAGT TATCCAAACC TTGCTGTTAC ATACTTACCA
CCCGTTGGAC TTGGATTAGT CGTAGTTTCA TTGGTCGCTG CATTTATGAG CACCGTAAGT
ACCTCAATCA ATTGGGGGGC AAGTTATCTT GCACATGATC TTTATAAGAG ATTTGTGAGG
CCATTCGCTG GGCCTAGAGA AATGATTTTT ATGGGCCAGC TAGCAAGTAT TTTGTTGCTT
CTAATTGGAG TCCTCACGGC TTTATTAAGT AACAGTATTG GTTCAATGTT TAGACTTGTT
ATTGCGATAG GTACAGGCCC AGGTGCTGTG CTTGTCCTTC GGTGGTTTTG GTGGCGAGTT
AATGCTCTAG CGGAACTTTC GGCAATGCTG AGTGGTTTTT TTATAGGCTT AATTACTTCA
GTTTCGCCTT ATTTCATAAT TGAAGATTTT GGAAAAAGAC TTTTATTCAC AACTTCATTT
TCAGCCGTGA TTTGGCTGCT TACCTTATTT TTCACTGAGC CAGAGTCTGA CGAGACACTC
AATAACTTTG TAATGCAGGT AAAACCTCCA GGCCCTGGCT GGAGCAAAAT ACGGAAGAAA
TTGAATATTG ATCCAGTTGA TTCTTTTTCA GTGCTTGGAT GTCGCTTCAT TTTAGGCTCA
TGTATTCTCT ATGGAGGCTT ACTCAGTATT GGAGCTTTCT TATTACATCA AGAAAGGAGC
GCTTGGATTG CACTCTCCAT TGCGGTCAGT TCTGTGTTTT TAATGAAGAA AACAAGACTA
ATAACTCAAT AA
 
Protein sequence
MTLIDWFILF VYLIFSLVLG IYISLKNHNE ADYFVAGRRL NGLLAGMSMA ATTFSIDTPL 
YVAGVIGTRG LAGNWEWWSF GLAHVAMTVI FAPLWRRSGV LTDAAFTELR YGGQAAAYLR
GIKAFLLSVP INCIGIGYAF LAMRKVAESL GVVDGHIVFG PFTDTILLMI LVALFLLVYT
VLGGLWAVVV NDFVQLVLAL LGAFAVCFVA LDASGGMTNL LTKLEALDRP ELLSLFPWTF
NKNGFNWLDS SGISITTFFA FISLQWWSFR RSDGGGEFIQ RLLATKDEKQ ATLAGIVFLI
VNYLVRSWLW ILVGLAGLVL LPQQADWELS YPNLAVTYLP PVGLGLVVVS LVAAFMSTVS
TSINWGASYL AHDLYKRFVR PFAGPREMIF MGQLASILLL LIGVLTALLS NSIGSMFRLV
IAIGTGPGAV LVLRWFWWRV NALAELSAML SGFFIGLITS VSPYFIIEDF GKRLLFTTSF
SAVIWLLTLF FTEPESDETL NNFVMQVKPP GPGWSKIRKK LNIDPVDSFS VLGCRFILGS
CILYGGLLSI GAFLLHQERS AWIALSIAVS SVFLMKKTRL ITQ